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  5. Sro430_g141290.1

Sro430_g141290.1 (Contig4379.g32923)


Aliases : Contig4379.g32923

Description : Leucine Rich Repeat


Gene families : OG_01_0000837 (OrthoFinder) Phylogenetic Tree(s): OG0000837_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro430_g141290.1
Cluster HCCA: Cluster_169

Target Alias Description ECC score Gene Family Method Actions
Sro1117_g243030.1 Contig1027.g10249 LRR receptor-like serine threonine-protein kinase 0.03 OrthoFinder
Sro2420_g327130.1 Contig3558.g27469 Leucine Rich Repeat 0.03 OrthoFinder
Sro3338_g346960.1 Contig3594.g27791 Hypothetical protein 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Enrichment
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Enrichment
BP GO:0000398 mRNA splicing, via spliceosome IEP Enrichment
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0005216 ion channel activity IEP Enrichment
CC GO:0005681 spliceosomal complex IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
BP GO:0006694 steroid biosynthetic process IEP Enrichment
BP GO:0006811 ion transport IEP Enrichment
BP GO:0008202 steroid metabolic process IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
MF GO:0015075 ion transmembrane transporter activity IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Enrichment
BP GO:0016071 mRNA metabolic process IEP Enrichment
MF GO:0016229 steroid dehydrogenase activity IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment

No InterPro domains available for this sequence

No external refs found!