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  5. Sro419_g139190.1

Sro419_g139190.1 (Contig4415.g33180)


Aliases : Contig4415.g33180

Description : Sensor kinase/phosphatase LuxQ


Gene families : OG_01_0000006 (OrthoFinder) Phylogenetic Tree(s): OG0000006_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro419_g139190.1
Cluster HCCA: Cluster_172

Target Alias Description ECC score Gene Family Method Actions
Sro1435_g272380.1 Contig4058.g31114 Hybrid signal transduction histidine kinase J 0.02 OrthoFinder
Sro20_g014160.1 Contig2954.g23446 Peroxide stress-activated histidine kinase mak2 0.06 OrthoFinder
Sro325_g117780.1 Contig3568.g27567 Respiration control sensor protein ArcB 0.03 OrthoFinder
Sro351_g124000.1 Contig4381.g32954 Respiration control sensor protein ArcB 0.04 OrthoFinder
Sro369_g128120.1 Contig1690.g15135 Hybrid signal transduction histidine kinase J 0.03 OrthoFinder
Sro431_g141430.1 Contig2042.g17546 Histidine kinase 0.05 OrthoFinder
Sro433_g141880.1 Contig4540.g33950 Sensor kinase/phosphatase LuxQ 0.04 OrthoFinder
Sro548_g164350.1 Contig1714.g15315 Sensor protein kinase WalK (Fragment) 0.03 OrthoFinder
XM_003057224.1 MicpuC2_8975, 8975 Signal transduction response regulator, receiver domain... 0.02 OrthoFinder
XM_003057225.1 MicpuC2_10763, 10763 Signal transduction histidine kinase,... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEA Interproscan
BP GO:0007165 signal transduction IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP Enrichment
BP GO:0006820 anion transport IEP Enrichment
MF GO:0016209 antioxidant activity IEP Enrichment
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Enrichment
BP GO:0019748 secondary metabolic process IEP Enrichment
BP GO:0030638 polyketide metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR003661 HisK_dim/P 64 129
IPR003594 HATPase_C 179 358
No external refs found!