1. Home
  2. Species
  3. Seminavis robusta
  4. Sequence
  5. Sro3868_g351580.1

Sro3868_g351580.1 (Contig2785.g22403)


Aliases : Contig2785.g22403

Description : Domain protein


Gene families : OG_01_0000790 (OrthoFinder) Phylogenetic Tree(s): OG0000790_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro3868_g351580.1
Cluster HCCA: Cluster_137

Target Alias Description ECC score Gene Family Method Actions
Sro116_g056950.1 Contig2228.g18471 (Lipo)protein 0.04 OrthoFinder
Sro1350_g265140.1 Contig1787.g15810 (LipO)protein 0.03 OrthoFinder
Sro14_g010750.1 Contig1128.g10824 Mycoplasma protein of unknown function, DUF285 0.03 OrthoFinder
Sro1590_g284430.1 Contig1504.g13753 Mycoplasma protein of unknown function, DUF285 0.03 OrthoFinder
Sro1708_g292680.1 Contig3919.g30036 (Lipo)protein 0.03 OrthoFinder
Sro2056_g312850.1 Contig4461.g33530 Mycoplasma protein of unknown function, DUF285 0.05 OrthoFinder
Sro212_g088110.1 Contig3756.g28794 (Lipo)protein 0.03 OrthoFinder
Sro260_g101620.1 Contig1663.g15014 Mycoplasma protein of unknown function, DUF285 0.03 OrthoFinder
Sro297_g110980.1 Contig251.g3087 (Lipo)protein 0.03 OrthoFinder
Sro3899_g351780.1 Contig3002.g23877 (LipO)protein 0.03 OrthoFinder
Sro742_g195960.1 Contig1214.g11412 Receptor-like protein kinase 0.04 OrthoFinder
Sro86_g045890.1 Contig2999.g23867 Mycoplasma protein of unknown function, DUF285 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Enrichment
BP GO:0006753 nucleoside phosphate metabolic process IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009117 nucleotide metabolic process IEP Enrichment
BP GO:0009165 nucleotide biosynthetic process IEP Enrichment
BP GO:0009187 cyclic nucleotide metabolic process IEP Enrichment
BP GO:0009190 cyclic nucleotide biosynthetic process IEP Enrichment
CC GO:0009521 photosystem IEP Enrichment
CC GO:0009523 photosystem II IEP Enrichment
BP GO:0015979 photosynthesis IEP Enrichment
BP GO:0018130 heterocycle biosynthetic process IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
BP GO:0019637 organophosphate metabolic process IEP Enrichment
MF GO:0030145 manganese ion binding IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
CC GO:0032993 protein-DNA complex IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Enrichment
BP GO:0035556 intracellular signal transduction IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
CC GO:0044815 DNA packaging complex IEP Enrichment
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Enrichment
BP GO:0090407 organophosphate biosynthetic process IEP Enrichment
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR005046 DUF285 4 65
IPR005046 DUF285 173 271
No external refs found!