Aliases : Contig623.g7611
Description : Rhomboid family
Gene families : OG_01_0019897 (OrthoFinder) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Sro367_g127860.1 | |
Cluster | HCCA: Cluster_189 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
PTI_07G01550.1 | No alias | Peptidase S54, rhomboid domain [Interproscan]. | 0.01 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004252 | serine-type endopeptidase activity | IEA | Interproscan |
CC | GO:0016021 | integral component of membrane | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004518 | nuclease activity | IEP | Enrichment |
MF | GO:0004519 | endonuclease activity | IEP | Enrichment |
MF | GO:0004520 | endodeoxyribonuclease activity | IEP | Enrichment |
MF | GO:0004536 | deoxyribonuclease activity | IEP | Enrichment |
BP | GO:0006260 | DNA replication | IEP | Enrichment |
BP | GO:0009059 | macromolecule biosynthetic process | IEP | Enrichment |
MF | GO:0016779 | nucleotidyltransferase activity | IEP | Enrichment |
MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | Enrichment |
MF | GO:0016888 | endodeoxyribonuclease activity, producing 5'-phosphomonoesters | IEP | Enrichment |
MF | GO:0016893 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | IEP | Enrichment |
BP | GO:0018142 | protein-DNA covalent cross-linking | IEP | Enrichment |
BP | GO:0018143 | nucleic acid-protein covalent cross-linking | IEP | Enrichment |
BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Enrichment |
MF | GO:0140097 | catalytic activity, acting on DNA | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR022764 | Peptidase_S54_rhomboid_dom | 126 | 213 |
No external refs found! |