1. Home
  2. Species
  3. Seminavis robusta
  4. Sequence
  5. Sro352_g124160.1

Sro352_g124160.1 (Contig2645.g21392)


Aliases : Contig2645.g21392

Description : Regulator of chromatin subfamily A-like protein 1


Gene families : OG_01_0000314 (OrthoFinder) Phylogenetic Tree(s): OG0000314_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro352_g124160.1
Cluster HCCA: Cluster_180

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001368.11 tig00001368_g8410.t1 No description available 0.02 OrthoFinder
Cre03.g199350 30787807 Chromatin organisation.chromatin remodeling... 0.01 OrthoFinder
Cz02g34030.t1 No alias HNH endonuclease; Helicase, C-terminal; SNF2-related,... 0.01 OrthoFinder
Cz02g36150.t1 No alias SNF2-related, N-terminal domain; Helicase, C-terminal... 0.01 OrthoFinder
EOD05731 No alias HNH endonuclease; SNF2-related, N-terminal domain [Interproscan]. 0.01 OrthoFinder
EOD11461 No alias SNF2-related, N-terminal domain [Interproscan]. 0.02 OrthoFinder
EOD13647 No alias DNA topoisomerase, type IA, zn finger; HNH endonuclease;... 0.02 OrthoFinder
PTI_05G03660.1 No alias Helicase, C-terminal; SNF2-related, N-terminal domain... 0.04 OrthoFinder
UNPLg00208.t1 No alias Helicase, C-terminal [Interproscan]. 0.02 OrthoFinder
XM_003055085.1 MicpuC2_50566, 50566 SNF2 super family 0.02 OrthoFinder
lcl|BLLF01001162.1_cds_GFH17528.1_12005 HaLaN_14186, GFH17528 Hypothetical protein 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Enrichment
BP GO:0001510 RNA methylation IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
MF GO:0004143 diacylglycerol kinase activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005963 magnesium-dependent protein serine/threonine phosphatase complex IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
BP GO:0007205 protein kinase C-activating G protein-coupled receptor signaling pathway IEP Enrichment
MF GO:0008017 microtubule binding IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
MF GO:0008170 N-methyltransferase activity IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
MF GO:0008276 protein methyltransferase activity IEP Enrichment
CC GO:0008287 protein serine/threonine phosphatase complex IEP Enrichment
BP GO:0009452 7-methylguanosine RNA capping IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
MF GO:0016278 lysine N-methyltransferase activity IEP Enrichment
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
BP GO:0016310 phosphorylation IEP Enrichment
MF GO:0016409 palmitoyltransferase activity IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Enrichment
MF GO:0019888 protein phosphatase regulator activity IEP Enrichment
CC GO:0030289 protein phosphatase 4 complex IEP Enrichment
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Enrichment
CC GO:0031464 Cul4A-RING E3 ubiquitin ligase complex IEP Enrichment
BP GO:0036260 RNA capping IEP Enrichment
MF GO:0042054 histone methyltransferase activity IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0043414 macromolecule methylation IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
CC GO:0080008 Cul4-RING E3 ubiquitin ligase complex IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
CC GO:0140535 intracellular protein-containing complex IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
CC GO:1903293 phosphatase complex IEP Enrichment
CC GO:1990234 transferase complex IEP Enrichment
InterPro domains Description Start Stop
IPR001650 Helicase_C 1082 1187
IPR000330 SNF2_N 638 884
No external refs found!