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  5. Sro348_g123190.1

Sro348_g123190.1 (Contig2346.g19285)


Aliases : Contig2346.g19285

Description : Histone H3


Gene families : OG_01_0000015 (OrthoFinder) Phylogenetic Tree(s): OG0000015_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro348_g123190.1
Cluster HCCA: Cluster_124

Target Alias Description ECC score Gene Family Method Actions
Cre06.g264650 30779911, HTR27 Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder
Cre06.g265000 30778874 Chromatin organisation.histones.H3-type histone 0.03 OrthoFinder
Cre06.g265250 30779294 Chromatin organisation.histones.H3-type histone 0.04 OrthoFinder
Cre06.g266650 30779741 Chromatin organisation.histones.H3-type histone 0.03 OrthoFinder
Cre06.g267950 30779543, HTR10 Chromatin organisation.histones.H3-type histone 0.03 OrthoFinder
Cre06.g268350 30778762, HTR9 Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder
Cre06.g274000 30779747, HTR7 Chromatin organisation.histones.H3-type histone 0.03 OrthoFinder
Cre06.g274101 30779608 Chromatin organisation.histones.H3-type histone 0.03 OrthoFinder
Cre06.g274350 30778588, HTR29 Chromatin organisation.histones.H3-type histone 0.03 OrthoFinder
Cre06.g274850 30778497 Chromatin organisation.histones.H3-type histone 0.03 OrthoFinder
Cre06.g275750 30779137 Chromatin organisation.histones.H3-type histone 0.03 OrthoFinder
Cre06.g276600 30779595 Chromatin organisation.histones.H3-type histone 0.03 OrthoFinder
Cre06.g276850 30778983, HTR24 Chromatin organisation.histones.H3-type histone 0.03 OrthoFinder
Cre12.g504650 30791932 Chromatin organisation.histones.H3-type histone 0.03 OrthoFinder
Cre12.g504800 30793536, HTR16 Chromatin organisation.histones.H3-type histone 0.03 OrthoFinder
Cre12.g505500 30793498, HTR17 Chromatin organisation.histones.H3-type histone 0.03 OrthoFinder
Cre12.g506300 30792290, HTR18 Chromatin organisation.histones.H3-type histone 0.03 OrthoFinder
Cre12.g506500 30792666, HTR35 Chromatin organisation.histones.H3-type histone 0.03 OrthoFinder
Cre13.g569950 30784075, HTR2 Chromatin organisation.histones.H3-type histone 0.03 OrthoFinder
Cre16.g650300 30777639, HTR39 Chromatin organisation.histones.H3-type histone 0.01 OrthoFinder
Cre17.g708150 30782647, HTR36 Chromatin organisation.histones.H3-type histone 0.03 OrthoFinder
Cre17.g708700 30782453, HTR20 Chromatin organisation.histones.H3-type histone 0.03 OrthoFinder
Cre17.g709050 30782593, HTR3 Chromatin organisation.histones.H3-type histone 0.03 OrthoFinder
Cz05g04150.t1 No alias Histone H2A/H2B/H3 [Interproscan]. 0.02 OrthoFinder
Cz07g08150.t1 No alias Histone H2A/H2B/H3 [Interproscan]. 0.03 OrthoFinder
Cz08g27160.t1 No alias Histone H2A/H2B/H3 [Interproscan]. 0.02 OrthoFinder
Cz13g04210.t1 No alias Histone H2A/H2B/H3 [Interproscan]. 0.03 OrthoFinder
Cz18g11080.t1 No alias Histone H2A/H2B/H3 [Interproscan]. 0.03 OrthoFinder
Dusal.0093s00026.1 33185350 Histone H2A/H2B/H3 [Interproscan]. 0.01 OrthoFinder
Dusal.0093s00033.1 33185318 Histone H2A/H2B/H3 [Interproscan]. 0.02 OrthoFinder
Dusal.0165s00022.1 33193361 Histone H2A/H2B/H3 [Interproscan]. 0.01 OrthoFinder
Dusal.0194s00024.1 33199901 Histone H2A/H2B/H3 [Interproscan]. 0.02 OrthoFinder
Dusal.0658s00002.1 33202429 Histone H2A/H2B/H3 [Interproscan]. 0.01 OrthoFinder
Dusal.1067s00005.1 33188990 Histone H2A/H2B/H3 [Interproscan]. 0.02 OrthoFinder
Dusal.1079s00002.1 33193518 Histone H2A/H2B/H3 [Interproscan]. 0.02 OrthoFinder
EOD22942 No alias Putative histone H3 [Ensembl]. 0.03 OrthoFinder
EOD31711 No alias Histone H2A/H2B/H3 [Interproscan]. 0.03 OrthoFinder
EOD33509 No alias Histone H2A/H2B/H3 [Interproscan]. 0.03 OrthoFinder
EOD34125 No alias Histone H2A/H2B/H3 [Interproscan]. 0.02 OrthoFinder
OT_11G02230.1 No alias Histone H2A/H2B/H3 [Interproscan]. 0.03 OrthoFinder
PTI_06G03830.1 No alias Histone H2A/H2B/H3 [Interproscan]. 0.02 OrthoFinder
PTI_06G03900.1 No alias Histone H2A/H2B/H3 [Interproscan]. 0.02 OrthoFinder
Vocar.0002s0598.1 32891063 Histone H2A/H2B/H3 [Interproscan]. 0.01 OrthoFinder
Vocar.0006s0042.1 32894081 Histone H2A/H2B/H3 [Interproscan]. 0.02 OrthoFinder
Vocar.0006s0183.1 32894260 Histone H2A/H2B/H3 [Interproscan]. 0.03 OrthoFinder
Vocar.0027s0142.1 32887220 Histone H2A/H2B/H3 [Interproscan]. 0.02 OrthoFinder
Vocar.0028s0101.1 32895667 Histone H2A/H2B/H3 [Interproscan]. 0.01 OrthoFinder
Vocar.0033s0145.1 32886459 Histone H2A/H2B/H3 [Interproscan]. 0.01 OrthoFinder
XM_003059175.1 MicpuC2_27286, 27286 Histone H2A/H2B/H3 [Interproscan]. 0.02 OrthoFinder
XM_003061662.1 MicpuC2_48264, 48264 Histone H2A/H2B/H3 [Interproscan]. 0.02 OrthoFinder
XM_003061708.1 MicpuC2_48289, 48289 Histone H3 0.02 OrthoFinder
lcl|LHPG02000018.1_cds_PRW32917.1_3775 PRW32917 Histone H3 0.01 OrthoFinder
lcl|LHPG02000018.1_cds_PRW33058.1_3765 PRW33058 Histone H3 0.03 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495863.1_1861 KAA8495863 Histone H3 0.01 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000030 mannosyltransferase activity IEP Enrichment
BP GO:0006486 protein glycosylation IEP Enrichment
BP GO:0006801 superoxide metabolic process IEP Enrichment
MF GO:0008146 sulfotransferase activity IEP Enrichment
BP GO:0009262 deoxyribonucleotide metabolic process IEP Enrichment
BP GO:0009263 deoxyribonucleotide biosynthetic process IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016757 glycosyltransferase activity IEP Enrichment
MF GO:0016758 hexosyltransferase activity IEP Enrichment
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP Enrichment
BP GO:0043413 macromolecule glycosylation IEP Enrichment
BP GO:0070085 glycosylation IEP Enrichment
BP GO:0072593 reactive oxygen species metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 1 132
No external refs found!