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  5. Sro344_g122350.1

Sro344_g122350.1 (Contig3448.g26823)


Aliases : Contig3448.g26823

Description : TRNA-2-methylthio-N(6)-dimethylallyladenosine synthase


Gene families : OG_01_0000871 (OrthoFinder) Phylogenetic Tree(s): OG0000871_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro344_g122350.1
Cluster HCCA: Cluster_148

Target Alias Description ECC score Gene Family Method Actions
EOD42013 No alias TRAM domain; Methylthiotransferase, N-terminal; Radical... 0.02 OrthoFinder
XM_002504580.1 MICPUN_66643, 66643 Methylthiotransferase, N-terminal; TRAM domain; Radical... 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
MF GO:0035596 methylthiotransferase activity IEA Interproscan
MF GO:0051536 iron-sulfur cluster binding IEA Interproscan
MF GO:0051539 4 iron, 4 sulfur cluster binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000030 mannosyltransferase activity IEP Enrichment
BP GO:0006486 protein glycosylation IEP Enrichment
MF GO:0016758 hexosyltransferase activity IEP Enrichment
BP GO:0043413 macromolecule glycosylation IEP Enrichment
BP GO:0070085 glycosylation IEP Enrichment
InterPro domains Description Start Stop
IPR007197 rSAM 408 578
IPR002792 TRAM_dom 635 698
IPR013848 Methylthiotransferase_N 249 349
No external refs found!