1. Home
  2. Species
  3. Seminavis robusta
  4. Sequence
  5. Sro333_g119610.1

Sro333_g119610.1 (Contig3012.g24057)


Aliases : Contig3012.g24057

Description : Domain of unknown function (DUF1995)


Gene families : OG_01_0001283 (OrthoFinder) Phylogenetic Tree(s): OG0001283_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro333_g119610.1
Cluster HCCA: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
Dusal.0037s00037.1 33185952 Domain of unknown function DUF1995 [Interproscan]. 0.02 OrthoFinder
PTI_11G04080.1 No alias Domain of unknown function DUF1995 [Interproscan]. 0.03 OrthoFinder
PTI_22G01070.1 No alias Domain of unknown function DUF1995 [Interproscan]. 0.03 OrthoFinder
TP02G05430.1 No alias Domain of unknown function DUF1995 [Interproscan]. 0.02 OrthoFinder
Transcript_contig_55497 55497 Domain of unknown function DUF1995 [Interproscan]. 0.02 OrthoFinder
Transcript_contig_56863 56863 Domain of unknown function DUF1995 [Interproscan]. 0.01 OrthoFinder
Transcript_contig_69017 69017 Domain of unknown function DUF1995 [Interproscan]. 0.02 OrthoFinder
XM_002505863.1 MICPUN_104022, 104022 Domain of unknown function DUF1995 [Interproscan]. 0.03 OrthoFinder
XM_003063779.1 MicpuC2_53512, 53512 Domain of unknown function DUF1995 [Interproscan]. 0.03 OrthoFinder
lcl|BLLF01000176.1_cds_GFH08669.1_3146 HaLaN_03668, GFH08669 Hypothetical protein 0.01 OrthoFinder
lcl|BLLF01001199.1_cds_GFH17776.1_12253 HaLaN_14477, GFH17776 DUF1995 domain-containing protein 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004180 carboxypeptidase activity IEP Enrichment
MF GO:0004181 metallocarboxypeptidase activity IEP Enrichment
MF GO:0004222 metalloendopeptidase activity IEP Enrichment
MF GO:0004527 exonuclease activity IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
MF GO:0004832 valine-tRNA ligase activity IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006438 valyl-tRNA aminoacylation IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008235 metalloexopeptidase activity IEP Enrichment
MF GO:0008237 metallopeptidase activity IEP Enrichment
MF GO:0008238 exopeptidase activity IEP Enrichment
MF GO:0015035 protein-disulfide reductase activity IEP Enrichment
MF GO:0015036 disulfide oxidoreductase activity IEP Enrichment
MF GO:0015291 secondary active transmembrane transporter activity IEP Enrichment
MF GO:0015297 antiporter activity IEP Enrichment
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Enrichment
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016859 cis-trans isomerase activity IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
MF GO:0022804 active transmembrane transporter activity IEP Enrichment
MF GO:0032977 membrane insertase activity IEP Enrichment
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0051259 protein complex oligomerization IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
MF GO:0140104 molecular carrier activity IEP Enrichment
MF GO:0140597 protein carrier activity IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR018962 DUF1995 26 246
No external refs found!