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  5. Sro32_g021090.1

Sro32_g021090.1 (Contig3715.g28582)


Aliases : Contig3715.g28582

Description : CRAL-TRIO lipid binding domain [Interproscan].


Gene families : OG_01_0000437 (OrthoFinder) Phylogenetic Tree(s): OG0000437_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro32_g021090.1
Cluster HCCA: Cluster_306

Target Alias Description ECC score Gene Family Method Actions
Sro133_g063090.1 Contig2274.g18868 Hypothetical protein 0.02 OrthoFinder
Sro1771_g296630.1 Contig3831.g29377 CRAL-TRIO lipid binding domain [Interproscan]. 0.02 OrthoFinder
Sro1874_g302980.1 Contig3840.g29507 CRAL-TRIO lipid binding domain [Interproscan]. 0.03 OrthoFinder
Sro2456_g328210.1 Contig2438.g19982 Hypothetical protein 0.02 OrthoFinder
Sro377_g130070.1 Contig75.g810 Hypothetical protein 0.03 OrthoFinder
Sro44_g026610.1 Contig358.g4830 CRAL-TRIO lipid binding domain [Interproscan]. 0.02 OrthoFinder
Sro451_g145670.1 Contig1599.g14511 CRAL-TRIO lipid binding domain [Interproscan]. 0.02 OrthoFinder
Sro628_g178080.1 Contig4318.g32581 CRAL-TRIO lipid binding domain [Interproscan]. 0.03 OrthoFinder
Sro688_g187340.1 Contig1782.g15780 CRAL-TRIO lipid binding domain [Interproscan]. 0.03 OrthoFinder
Sro994_g229000.1 Contig3591.g27752 CRAL-TRIO lipid binding domain [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0015276 ligand-gated ion channel activity IEP Enrichment
MF GO:0022834 ligand-gated channel activity IEP Enrichment
MF GO:0022836 gated channel activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
MF GO:0033218 amide binding IEP Enrichment
MF GO:0120227 acyl-CoA binding IEP Enrichment
MF GO:1901567 fatty acid derivative binding IEP Enrichment
MF GO:1901681 sulfur compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR001251 CRAL-TRIO_dom 162 229
No external refs found!