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  5. Sro322_g116960.1

Sro322_g116960.1 (Contig1229.g11534)


Aliases : Contig1229.g11534

Description : Extracellular solute-binding protein


Gene families : OG_01_0000402 (OrthoFinder) Phylogenetic Tree(s): OG0000402_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro322_g116960.1
Cluster HCCA: Cluster_136

Target Alias Description ECC score Gene Family Method Actions
Sro1105_g241930.1 Contig2574.g20912 Putative amino-acid ABC transporter-binding protein YhdW 0.03 OrthoFinder
Sro159_g071820.1 Contig500.g6722 Extracellular solute-binding protein 0.06 OrthoFinder
Sro2102_g314640.1 Contig4016.g30896 Extracellular solute-binding protein 0.04 OrthoFinder
Sro2307_g322760.1 Contig1768.g15637 Putative amino-acid ABC transporter-binding protein YhdW 0.05 OrthoFinder
Sro282_g107620.1 Contig1420.g13105 Extracellular solute-binding protein 0.05 OrthoFinder
Sro474_g150180.1 Contig2775.g22314 Putative amino-acid ABC transporter-binding protein YhdW 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0004721 phosphoprotein phosphatase activity IEP Enrichment
MF GO:0004888 transmembrane signaling receptor activity IEP Enrichment
MF GO:0004930 G protein-coupled receptor activity IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Enrichment
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Enrichment
BP GO:0016311 dephosphorylation IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
MF GO:0016791 phosphatase activity IEP Enrichment
MF GO:0019825 oxygen binding IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0038023 signaling receptor activity IEP Enrichment
MF GO:0060089 molecular transducer activity IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment

No InterPro domains available for this sequence

No external refs found!