Sro321_g116720.1 (Contig56.g428)


Aliases : Contig56.g428

Description : Leucine Rich Repeat


Gene families : OG_01_0000035 (OrthoFinder) Phylogenetic Tree(s): OG0000035_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro321_g116720.1
Cluster HCCA: Cluster_333

Target Alias Description ECC score Gene Family Method Actions
Sro106_g053670.1 Contig1122.g10764 Leucine Rich Repeat 0.03 OrthoFinder
Sro10_g008370.1 Contig1.g61 Leucine rich repeat 0.03 OrthoFinder
Sro1126_g244030.1 Contig1609.g14564 LRR receptor-like serine threonine-protein kinase 0.04 OrthoFinder
Sro1236_g255140.1 Contig1374.g12617 Leucine Rich Repeat 0.03 OrthoFinder
Sro1331_g263510.1 Contig1733.g15457 Leucine rich repeat N-terminal domain 0.04 OrthoFinder
Sro1543_g281110.1 Contig1530.g13907 Leucine Rich Repeat 0.03 OrthoFinder
Sro1543_g281120.1 Contig1530.g13908 Hypothetical protein 0.04 OrthoFinder
Sro1685_g291070.1 Contig3608.g27874 LRR receptor-like serine threonine-protein kinase 0.04 OrthoFinder
Sro1781_g297090.1 Contig230.g2769 Receptor-like protein kinase precursor 0.04 OrthoFinder
Sro2000_g310250.1 Contig1011.g10144 Leucine Rich Repeat 0.03 OrthoFinder
Sro2223_g319710.1 Contig2179.g18196 Leucine Rich Repeat 0.05 OrthoFinder
Sro2273_g321510.1 Contig1841.g16144 Leucine Rich Repeat 0.03 OrthoFinder
Sro242_g096620.1 Contig554.g7080 Leucine Rich Repeat 0.03 OrthoFinder
Sro2607_g332450.1 Contig1442.g13260 Leucine Rich Repeat 0.05 OrthoFinder
Sro265_g102830.1 Contig1806.g15913 Leucine rich repeat 0.03 OrthoFinder
Sro273_g105050.1 Contig4205.g31986 LRR receptor-like serine threonine-protein kinase 0.03 OrthoFinder
Sro283_g107690.1 Contig4255.g32200 LRR receptor-like serine threonine-protein kinase At4g08850 0.03 OrthoFinder
Sro283_g107810.1 Contig4255.g32212 Leucine Rich Repeat 0.03 OrthoFinder
Sro320_g116550.1 Contig3665.g28316 Leucine Rich Repeat 0.04 OrthoFinder
Sro320_g116560.1 Contig3665.g28317 Leucine Rich Repeat 0.04 OrthoFinder
Sro32_g020790.1 Contig3715.g28552 LRR receptor-like serine threonine-protein kinase At4g08850-like 0.03 OrthoFinder
Sro32_g020820.1 Contig3715.g28555 LRR receptor-like serine threonine-protein kinase At4g08850-like 0.04 OrthoFinder
Sro337_g120680.1 Contig2800.g22526 Leucine-rich repeat-containing protein 0.03 OrthoFinder
Sro449_g145310.1 Contig3482.g27001 Leucine Rich Repeat 0.04 OrthoFinder
Sro52_g030970.1 Contig3190.g25180 Leucine Rich Repeat 0.05 OrthoFinder
Sro52_g031140.1 Contig3190.g25197 Leucine Rich Repeat 0.03 OrthoFinder
Sro52_g031200.1 Contig3190.g25203 LRR receptor-like serine threonine-protein kinase 0.03 OrthoFinder
Sro52_g031230.1 Contig3190.g25206 LRR receptor-like serine threonine-protein kinase 0.03 OrthoFinder
Sro558_g166260.1 Contig3624.g28024 Leucine Rich Repeat 0.03 OrthoFinder
Sro578_g169850.1 Contig83.g894 Leucine Rich Repeat 0.04 OrthoFinder
Sro74_g040710.1 Contig4700.g34933 Leucine Rich Repeat 0.06 OrthoFinder
Sro755_g197630.1 Contig3465.g26898 Leucine Rich Repeat 0.03 OrthoFinder
Sro895_g217150.1 Contig1937.g16657 Leucine Rich Repeat 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Enrichment
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Enrichment
MF GO:0004673 protein histidine kinase activity IEP Enrichment
MF GO:0004888 transmembrane signaling receptor activity IEP Enrichment
MF GO:0004930 G protein-coupled receptor activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Enrichment
MF GO:0015276 ligand-gated ion channel activity IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
MF GO:0016763 pentosyltransferase activity IEP Enrichment
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Enrichment
MF GO:0022834 ligand-gated channel activity IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
MF GO:0038023 signaling receptor activity IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
MF GO:0060089 molecular transducer activity IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
MF GO:0140299 small molecule sensor activity IEP Enrichment

No InterPro domains available for this sequence

No external refs found!