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  5. Sro3214_g345410.1

Sro3214_g345410.1 (Contig3122.g24805)


Aliases : Contig3122.g24805

Description : Carboxyl-terminal-processing peptidase


Gene families : OG_01_0000478 (OrthoFinder) Phylogenetic Tree(s): OG0000478_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro3214_g345410.1
Cluster HCCA: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000900.16 tig00000900_g5370.t1 Carboxyl-terminal-processing peptidase 2, chloroplastic... 0.03 OrthoFinder
Cpa|evm.model.tig00001532.10 tig00001532_g9277.t1 C-terminal processing peptidase, chloroplastic... 0.01 OrthoFinder
Cre06.g265850 30778480, TCP2 Protein modification.peptide maturation.plastid.CtpA... 0.01 OrthoFinder
Cre10.g420550 30790857 Protein modification.peptide maturation.plastid.CtpA... 0.05 OrthoFinder
Cz12g00210.t1 No alias Tail specific protease; PDZ domain 6 [Interproscan]. 0.02 OrthoFinder
OT_01G00750.1 No alias PDZ domain 6; Tail specific protease [Interproscan]. 0.01 OrthoFinder
Vocar.0016s0059.1 32898011 PDZ domain 6; Tail specific protease [Interproscan]. 0.01 OrthoFinder
XM_002502009.1 MICPUN_58436, 58436 Photosystem II D1 protease (CTPA) 0.02 OrthoFinder
XM_002506403.1 MICPUN_88502, 88502 PDZ domain 6; Tail specific protease [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01005111.1_cds_GFH30741.1_25218 HaLaN_29654, GFH30741 Carboxyl-terminal-processing peptidase chloroplastic isoform X1 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
BP GO:0006508 proteolysis IEA Interproscan
MF GO:0008236 serine-type peptidase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Enrichment
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004180 carboxypeptidase activity IEP Enrichment
MF GO:0004181 metallocarboxypeptidase activity IEP Enrichment
MF GO:0004222 metalloendopeptidase activity IEP Enrichment
MF GO:0004527 exonuclease activity IEP Enrichment
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
MF GO:0008235 metalloexopeptidase activity IEP Enrichment
MF GO:0008237 metallopeptidase activity IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
CC GO:0009654 photosystem II oxygen evolving complex IEP Enrichment
BP GO:0010207 photosystem II assembly IEP Enrichment
MF GO:0015035 protein-disulfide reductase activity IEP Enrichment
MF GO:0015036 disulfide oxidoreductase activity IEP Enrichment
MF GO:0015291 secondary active transmembrane transporter activity IEP Enrichment
MF GO:0015297 antiporter activity IEP Enrichment
BP GO:0015979 photosynthesis IEP Enrichment
MF GO:0016209 antioxidant activity IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Enrichment
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016851 magnesium chelatase activity IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016859 cis-trans isomerase activity IEP Enrichment
CC GO:0019898 extrinsic component of membrane IEP Enrichment
MF GO:0022804 active transmembrane transporter activity IEP Enrichment
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP Enrichment
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Enrichment
MF GO:0050660 flavin adenine dinucleotide binding IEP Enrichment
MF GO:0051002 ligase activity, forming nitrogen-metal bonds IEP Enrichment
MF GO:0051003 ligase activity, forming nitrogen-metal bonds, forming coordination complexes IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
CC GO:1990204 oxidoreductase complex IEP Enrichment
InterPro domains Description Start Stop
IPR001478 PDZ 202 276
IPR005151 Tail-specific_protease 307 473
No external refs found!