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  5. Sro320_g116580.1

Sro320_g116580.1 (Contig3665.g28319)


Aliases : Contig3665.g28319

Description : Leucine Rich Repeat


Gene families : OG_01_0000159 (OrthoFinder) Phylogenetic Tree(s): OG0000159_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro320_g116580.1
Cluster HCCA: Cluster_67

Target Alias Description ECC score Gene Family Method Actions
Sro1104_g241810.1 Contig4546.g33967 Leucine Rich Repeat 0.03 OrthoFinder
Sro1308_g261400.1 Contig2858.g22916 Receptor-like protein 0.05 OrthoFinder
Sro1715_g293070.1 Contig3682.g28417 Leucine Rich Repeat 0.04 OrthoFinder
Sro186_g080700.1 Contig266.g3351 Leucine Rich Repeat 0.05 OrthoFinder
Sro1928_g306040.1 Contig2945.g23386 Leucine Rich Repeat 0.02 OrthoFinder
Sro2120_g315390.1 Contig3476.g26953 Leucine Rich Repeat 0.02 OrthoFinder
Sro2120_g315410.1 Contig3476.g26955 Leucine Rich Repeat 0.04 OrthoFinder
Sro320_g116600.1 Contig3665.g28321 Leucine Rich Repeat 0.03 OrthoFinder
Sro435_g142380.1 Contig492.g6644 Leucine Rich Repeat 0.03 OrthoFinder
Sro496_g154670.1 Contig3388.g26497 Leucine Rich Repeat 0.07 OrthoFinder
Sro614_g175770.1 Contig1589.g14431 Leucine Rich Repeat 0.03 OrthoFinder
Sro820_g207300.1 Contig34.g212 Leucine rich repeat N-terminal domain 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004888 transmembrane signaling receptor activity IEP Enrichment
MF GO:0004930 G protein-coupled receptor activity IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
MF GO:0038023 signaling receptor activity IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
MF GO:0060089 molecular transducer activity IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 711 731
No external refs found!