Sro302_g112210.1 (Contig378.g5079)

Aliases : Contig378.g5079

Description : Gamma-aminobutyric acid (GABA) B receptor

Gene families : OG_01_0000254 (OrthoFinder) Phylogenetic Tree(s): OG0000254_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sro302_g112210.1
Cluster	HCCA: Cluster_152

Target	Alias	Description	ECC score	Gene Family Method
Sro1124_g243790.1	Contig4358.g32837	Gamma-aminobutyric acid (GABA) B receptor	0.06	OrthoFinder
Sro1272_g258200.1	Contig3783.g29037	Gamma-aminobutyric acid (GABA) B receptor	0.02	OrthoFinder
Sro141_g065900.1	Contig65.g614	Acid type B receptor subunit 2	0.04	OrthoFinder
Sro1778_g296990.1	Contig1025.g10228	Gamma-aminobutyric acid (GABA) B receptor	0.05	OrthoFinder
Sro177_g077840.2	No alias	GPCR family 3, C-terminal [Interproscan].	0.03	OrthoFinder
Sro302_g112160.2	No alias	Receptor, ligand binding region; GPCR family 3,...	0.03	OrthoFinder
Sro501_g155460.1	Contig1458.g13359	Acid type B receptor subunit 2	0.01	OrthoFinder
Sro618_g176190.1	Contig3757.g28812	Gamma-aminobutyric acid (GABA) B receptor	0.04	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0004888	transmembrane signaling receptor activity	None	Extended
MF	GO:0004930	G protein-coupled receptor activity	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0007186	G protein-coupled receptor signaling pathway	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016021	integral component of membrane	IEA	Interproscan
CC	GO:0031224	intrinsic component of membrane	None	Extended
MF	GO:0038023	signaling receptor activity	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
MF	GO:0060089	molecular transducer activity	None	Extended
BP	GO:0065007	biological regulation	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	Enrichment
MF	GO:0005506	iron ion binding	IEP	Enrichment
BP	GO:0008610	lipid biosynthetic process	IEP	Enrichment
BP	GO:0016567	protein ubiquitination	IEP	Enrichment
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	Enrichment
BP	GO:0032446	protein modification by small protein conjugation	IEP	Enrichment
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR017978	GPCR_3_C	556	802
IPR001828	ANF_lig-bd_rcpt	169	466

External Links

No external refs found!