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  5. Sro28_g018640.1

Sro28_g018640.1 (Contig404.g5473)


Aliases : Contig404.g5473

Description : Beta-induced protein ig-h3


Gene families : OG_01_0000134 (OrthoFinder) Phylogenetic Tree(s): OG0000134_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro28_g018640.1
Cluster HCCA: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
Cre12.g492650 30793520, FAS2 No description available 0.02 OrthoFinder
Cre16.g679445 30778196, FAS6 No description available 0.01 OrthoFinder
Cz04g35190.t1 No alias FAS1 domain [Interproscan]. 0.03 OrthoFinder
Cz14g01120.t1 No alias FAS1 domain [Interproscan]. 0.05 OrthoFinder
TP20G00920.1 No alias FAS1 domain [Interproscan]. 0.04 OrthoFinder
Vocar.0039s0020.1 32897778 FAS1 domain [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Enrichment
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004222 metalloendopeptidase activity IEP Enrichment
MF GO:0004527 exonuclease activity IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
CC GO:0005886 plasma membrane IEP Enrichment
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008237 metallopeptidase activity IEP Enrichment
MF GO:0008408 3'-5' exonuclease activity IEP Enrichment
CC GO:0009521 photosystem IEP Enrichment
CC GO:0009523 photosystem II IEP Enrichment
CC GO:0009654 photosystem II oxygen evolving complex IEP Enrichment
BP GO:0010207 photosystem II assembly IEP Enrichment
BP GO:0015979 photosynthesis IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
MF GO:0016859 cis-trans isomerase activity IEP Enrichment
CC GO:0019898 extrinsic component of membrane IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
CC GO:1990204 oxidoreductase complex IEP Enrichment
InterPro domains Description Start Stop
IPR000782 FAS1_domain 170 292
IPR000782 FAS1_domain 36 154
No external refs found!