1. Home
  2. Species
  3. Seminavis robusta
  4. Sequence
  5. Sro28_g018550.1

Sro28_g018550.1 (Contig404.g5464)


Aliases : Contig404.g5464

Description : Extracellular solute-binding protein


Gene families : OG_01_0000402 (OrthoFinder) Phylogenetic Tree(s): OG0000402_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro28_g018550.1
Cluster HCCA: Cluster_279

Target Alias Description ECC score Gene Family Method Actions
Sro1084_g239490.1 Contig3162.g25056 Extracellular solute-binding protein 0.07 OrthoFinder
Sro1903_g304520.1 Contig4361.g32859 Putative amino-acid ABC transporter-binding protein YhdW 0.05 OrthoFinder
Sro1920_g305520.1 Contig2527.g20644 Extracellular solute-binding protein 0.02 OrthoFinder
Sro238_g095580.1 Contig99.g1204 Extracellular solute-binding protein 0.06 OrthoFinder
Sro441_g143600.1 Contig470.g6374 Extracellular solute-binding protein 0.03 OrthoFinder
Sro474_g150260.1 Contig2775.g22322 Putative amino-acid ABC transporter-binding protein YhdW 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
MF GO:0004888 transmembrane signaling receptor activity IEP Enrichment
MF GO:0004930 G protein-coupled receptor activity IEP Enrichment
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Enrichment
CC GO:0018995 host cellular component IEP Enrichment
CC GO:0033643 host cell part IEP Enrichment
CC GO:0033646 host intracellular part IEP Enrichment
CC GO:0033647 host intracellular organelle IEP Enrichment
CC GO:0033648 host intracellular membrane-bounded organelle IEP Enrichment
MF GO:0038023 signaling receptor activity IEP Enrichment
CC GO:0042025 host cell nucleus IEP Enrichment
MF GO:0043565 sequence-specific DNA binding IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
MF GO:0060089 molecular transducer activity IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
MF GO:0140110 transcription regulator activity IEP Enrichment

No InterPro domains available for this sequence

No external refs found!