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  5. Sro289_g109030.1

Sro289_g109030.1 (Contig4471.g33587)


Aliases : Contig4471.g33587

Description : RCC1 and BTB domain-containing protein 2


Gene families : OG_01_0000020 (OrthoFinder) Phylogenetic Tree(s): OG0000020_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro289_g109030.1
Cluster HCCA: Cluster_180

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000269.66 tig00000269_g23727.t1 Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cpa|evm.model.tig00000430.61 tig00000430_g653.t1 Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana 0.01 OrthoFinder
Cpa|evm.model.tig00020938.2 tig00020938_g16128.t1 Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cpa|evm.model.tig00021178.12 tig00021178_g19202.t2 No description available 0.01 OrthoFinder
Cpa|evm.model.tig00021352.24 tig00021352_g20694.t1 Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cz07g00140.t1 No alias Regulator of chromosome condensation, RCC1 [Interproscan]. 0.02 OrthoFinder
Dusal.0071s00015.1 33185715 Regulator of chromosome condensation, RCC1 [Interproscan]. 0.01 OrthoFinder
EOD12960 No alias Regulator of chromosome condensation (RCC1) repeat;... 0.02 OrthoFinder
PTI_10G02450.1 No alias Regulator of chromosome condensation, RCC1 [Interproscan]. 0.02 OrthoFinder
PTI_12G00160.1 No alias Regulator of chromosome condensation (RCC1) repeat;... 0.03 OrthoFinder
SymbC1.scaffold3997.3 3997.3 Regulator of chromosome condensation, RCC1 [Interproscan]. 0.02 OrthoFinder
TP06G07030.1 No alias Glutathione-specific gamma-glutamylcyclotransferase;... 0.01 OrthoFinder
Transcript_contig_387 387 Regulator of chromosome condensation, RCC1 [Interproscan]. 0.01 OrthoFinder
Transcript_contig_79616 79616 Regulator of chromosome condensation, RCC1 [Interproscan]. 0.01 OrthoFinder
Vocar.0006s0269.1 32893895 Regulator of chromosome condensation, RCC1 [Interproscan]. 0.02 OrthoFinder
XM_002508379.1 MICPUN_69279, 69279 Regulator of chromosome condensation, RCC1 [Interproscan]. 0.03 OrthoFinder
XM_003055034.1 MicpuC2_50470, 50470 Regulator of chromosome condensation, RCC1; Brevis radix... 0.02 OrthoFinder
lcl|BLLF01000645.1_cds_GFH13724.1_8201 HaLaN_09662, GFH13724 Regulator of chromosome condensation, RCC1 [Interproscan]. 0.01 OrthoFinder
lcl|BLLF01002292.1_cds_GFH23517.1_17994 HaLaN_21140, GFH23517 Regulator of chromosome condensation (RCC1) repeat;... 0.01 OrthoFinder
lcl|BLLF01002473.1_cds_GFH24209.1_18686 HaLaN_21957, GFH24209 UV-resistance 8 protein 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005956 protein kinase CK2 complex IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0006796 phosphate-containing compound metabolic process IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
MF GO:0008017 microtubule binding IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
BP GO:0016310 phosphorylation IEP Enrichment
MF GO:0016409 palmitoyltransferase activity IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0019207 kinase regulator activity IEP Enrichment
MF GO:0019887 protein kinase regulator activity IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR000210 BTB/POZ_dom 442 545
IPR000408 Reg_chr_condens 261 307
IPR000408 Reg_chr_condens 362 411
IPR000408 Reg_chr_condens 95 144
IPR000408 Reg_chr_condens 46 92
IPR000408 Reg_chr_condens 310 359
IPR000408 Reg_chr_condens 147 196
IPR000408 Reg_chr_condens 200 250
No external refs found!