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  5. Sro2890_g339540.1

Sro2890_g339540.1 (Contig1304.g12098)


Aliases : Contig1304.g12098

Description : Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B


Gene families : OG_01_0001230 (OrthoFinder) Phylogenetic Tree(s): OG0001230_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro2890_g339540.1
Cluster HCCA: Cluster_131

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000342.26 tig00000342_g24211.t1 Glutamyl-tRNA(Gln) amidotransferase subunit B-2,... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0016874 ligase activity IEA Interproscan
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Enrichment
BP GO:0000160 phosphorelay signal transduction system IEP Enrichment
BP GO:0001522 pseudouridine synthesis IEP Enrichment
MF GO:0004673 protein histidine kinase activity IEP Enrichment
MF GO:0004788 thiamine diphosphokinase activity IEP Enrichment
BP GO:0006790 sulfur compound metabolic process IEP Enrichment
BP GO:0009229 thiamine diphosphate biosynthetic process IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
MF GO:0009982 pseudouridine synthase activity IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
MF GO:0016603 glutaminyl-peptide cyclotransferase activity IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016755 aminoacyltransferase activity IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Enrichment
MF GO:0016778 diphosphotransferase activity IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
BP GO:0017186 peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase IEP Enrichment
BP GO:0018193 peptidyl-amino acid modification IEP Enrichment
BP GO:0018199 peptidyl-glutamine modification IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
MF GO:0030975 thiamine binding IEP Enrichment
BP GO:0042357 thiamine diphosphate metabolic process IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0044272 sulfur compound biosynthetic process IEP Enrichment
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Enrichment
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Enrichment
MF GO:0140299 small molecule sensor activity IEP Enrichment
MF GO:1901681 sulfur compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR018027 Asn/Gln_amidotransferase 442 594
IPR006075 Asn/Gln-tRNA_Trfase_suB/E_cat 57 368
No external refs found!