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  5. Sro27_g018420.1

Sro27_g018420.1 (Contig3926.g30103)


Aliases : Contig3926.g30103

Description : Hypothetical protein


Gene families : OG_01_0000566 (OrthoFinder) Phylogenetic Tree(s): OG0000566_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro27_g018420.1

Target Alias Description ECC score Gene Family Method Actions
Sro1277_g258640.1 Contig3253.g25669 Hypothetical protein 0.03 OrthoFinder
Sro1424_g271410.1 Contig1069.g10415 Hypothetical protein 0.03 OrthoFinder
Sro1525_g279690.1 Contig3458.g26841 Inherit from NOG: Hemolysin-type calcium-binding 0.05 OrthoFinder
Sro1525_g279710.1 Contig3458.g26843 Hypothetical protein 0.03 OrthoFinder
Sro16_g011700.1 Contig916.g9607 Hypothetical protein 0.03 OrthoFinder
Sro16_g011710.1 Contig916.g9608 Hypothetical protein 0.05 OrthoFinder
Sro179_g078490.1 Contig4117.g31441 Von Willebrand factor type D protein 0.03 OrthoFinder
Sro2669_g334250.1 Contig3859.g29703 Protein of unknown function (DUF725) 0.03 OrthoFinder
Sro346_g348251.1 No alias Hypothetical protein 0.04 OrthoFinder
Sro395_g134000.1 Contig4272.g32319 Hypothetical protein 0.03 OrthoFinder
Sro52_g030960.1 Contig3190.g25179 Domain-containing protein 0.03 OrthoFinder
Sro660_g182920.1 Contig1196.g11297 Lectin C-type domain 0.03 OrthoFinder
Sro691_g187860.1 Contig1133.g10881 Hypothetical protein 0.04 OrthoFinder
Sro77_g041850.1 Contig338.g4580 Hypothetical protein 0.03 OrthoFinder
Sro946_g223340.1 Contig2147.g18094 von Willebrand factor, type D domain [Interproscan]. 0.04 OrthoFinder
Sro978_g227100.1 Contig212.g2516 Hypothetical protein 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
BP GO:0006810 transport IEP Enrichment
MF GO:0015293 symporter activity IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
MF GO:0071949 FAD binding IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment

No InterPro domains available for this sequence

No external refs found!