1. Home
  2. Species
  3. Seminavis robusta
  4. Sequence
  5. Sro2785_g337000.1

Sro2785_g337000.1 (Contig449.g6083)


Aliases : Contig449.g6083

Description : U box domain [Interproscan].


Gene families : OG_01_0000179 (OrthoFinder) Phylogenetic Tree(s): OG0000179_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro2785_g337000.1

Target Alias Description ECC score Gene Family Method Actions
Sro1227_g254310.1 Contig334.g4443 U-box domain-containing protein 0.02 OrthoFinder
Sro1311_g261780.1 Contig1682.g15105 Sel1 domain protein repeat-containing protein 0.02 OrthoFinder
Sro1438_g272650.1 Contig3435.g26744 Sel1 domain protein repeat-containing protein 0.06 OrthoFinder
Sro214_g088890.1 Contig282.g3674 Sel1 domain protein repeat-containing protein 0.02 OrthoFinder
Sro256_g100570.1 Contig3587.g27702 Hypothetical protein 0.02 OrthoFinder
Sro2646_g333590.1 Contig1915.g16544 Sel1 domain protein repeat-containing protein 0.02 OrthoFinder
Sro361_g126480.1 Contig1094.g10573 SAM and U-box domain-containing protein 1 0.02 OrthoFinder
Sro3_g002900.1 Contig3832.g29475 Sel1 domain protein repeat-containing protein 0.04 OrthoFinder
Sro59_g034410.1 Contig571.g7287 Sel1 domain protein repeat-containing protein 0.02 OrthoFinder
Sro793_g203310.1 Contig534.g6939 Sel1 domain protein repeat-containing protein 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA Interproscan
BP GO:0016567 protein ubiquitination IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0007154 cell communication IEP Enrichment
InterPro domains Description Start Stop
IPR003613 Ubox_domain 58 108
No external refs found!