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Aliases : Contig1015.g10160
Description : Pentaxin family
Gene families : OG_01_0000220 (OrthoFinder) Phylogenetic Tree(s): OG0000220_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Sro2757_g336340.1 | |
| Cluster | HCCA: Cluster_152 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Sro116_g056940.1 | Contig2228.g18470 | ECF subfamily RNA polymerase sigma-24 subunit | 0.05 | OrthoFinder | |
| Sro144_g067110.1 | Contig3873.g29810 | ECF subfamily RNA polymerase sigma-24 subunit | 0.02 | OrthoFinder | |
| Sro1913_g305010.1 | Contig2551.g20751 | Domain protein | 0.05 | OrthoFinder | |
| Sro2994_g341790.1 | Contig3693.g28478 | Calcium-binding EGF domain | 0.04 | OrthoFinder | |
| Sro431_g141380.1 | Contig2042.g17541 | Laminin G sub domain 2 | 0.04 | OrthoFinder | |
| Sro8_g006730.1 | Contig89.g986 | ECF subfamily RNA polymerase sigma-24 subunit | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003896 | DNA primase activity | IEP | Enrichment |
| MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | Enrichment |
| BP | GO:0006753 | nucleoside phosphate metabolic process | IEP | Enrichment |
| BP | GO:0007165 | signal transduction | IEP | Enrichment |
| BP | GO:0009058 | biosynthetic process | IEP | Enrichment |
| BP | GO:0009117 | nucleotide metabolic process | IEP | Enrichment |
| BP | GO:0009165 | nucleotide biosynthetic process | IEP | Enrichment |
| BP | GO:0009187 | cyclic nucleotide metabolic process | IEP | Enrichment |
| BP | GO:0009190 | cyclic nucleotide biosynthetic process | IEP | Enrichment |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | Enrichment |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | Enrichment |
| BP | GO:0019637 | organophosphate metabolic process | IEP | Enrichment |
| MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | Enrichment |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | Enrichment |
| BP | GO:0035556 | intracellular signal transduction | IEP | Enrichment |
| BP | GO:0044249 | cellular biosynthetic process | IEP | Enrichment |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Enrichment |
| BP | GO:0044281 | small molecule metabolic process | IEP | Enrichment |
| BP | GO:0050789 | regulation of biological process | IEP | Enrichment |
| BP | GO:0050794 | regulation of cellular process | IEP | Enrichment |
| BP | GO:0055086 | nucleobase-containing small molecule metabolic process | IEP | Enrichment |
| BP | GO:0065007 | biological regulation | IEP | Enrichment |
| BP | GO:0090407 | organophosphate biosynthetic process | IEP | Enrichment |
| MF | GO:0097747 | RNA polymerase activity | IEP | Enrichment |
| BP | GO:1901293 | nucleoside phosphate biosynthetic process | IEP | Enrichment |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | Enrichment |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | Enrichment |
No InterPro domains available for this sequence
| No external refs found! |