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  5. Sro2738_g335950.1

Sro2738_g335950.1 (Contig3767.g28935)


Aliases : Contig3767.g28935

Description : DNA topoisomerase 2 top-2


Gene families : OG_01_0001339 (OrthoFinder) Phylogenetic Tree(s): OG0001339_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro2738_g335950.1
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
Dusal.0487s00005.1 33203263 Histidine kinase/HSP90-like ATPase; C-terminal... 0.02 OrthoFinder
OT_13G00120.1 No alias TOPRIM domain; DNA topoisomerase, type IIA, subunit B,... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006265 DNA topological change IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP Enrichment
BP GO:0006486 protein glycosylation IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
MF GO:0008171 O-methyltransferase activity IEP Enrichment
BP GO:0009262 deoxyribonucleotide metabolic process IEP Enrichment
BP GO:0009263 deoxyribonucleotide biosynthetic process IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
BP GO:0043413 macromolecule glycosylation IEP Enrichment
BP GO:0070085 glycosylation IEP Enrichment
BP GO:1901137 carbohydrate derivative biosynthetic process IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR003594 HATPase_C 170 283
IPR013506 Topo_IIA_bsu_dom2 403 537
IPR006171 TOPRIM_domain 574 675
IPR031660 TOPRIM_C 701 836
IPR002205 Topo_IIA_A/C 838 1146
No external refs found!