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Aliases : Contig1806.g15913
Description : Leucine rich repeat
Gene families : OG_01_0000035 (OrthoFinder) Phylogenetic Tree(s): OG0000035_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Sro265_g102830.1 | |
| Cluster | HCCA: Cluster_226 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Sro106_g053670.1 | Contig1122.g10764 | Leucine Rich Repeat | 0.04 | OrthoFinder | |
| Sro1126_g244030.1 | Contig1609.g14564 | LRR receptor-like serine threonine-protein kinase | 0.03 | OrthoFinder | |
| Sro1331_g263500.1 | Contig1733.g15456 | LRR receptor-like serine threonine-protein kinase | 0.03 | OrthoFinder | |
| Sro2031_g311840.1 | Contig1930.g16631 | Hypothetical protein | 0.03 | OrthoFinder | |
| Sro2929_g340440.1 | Contig3350.g26218 | LRR receptor-like serine threonine-protein kinase At4g08850-like | 0.03 | OrthoFinder | |
| Sro302_g112200.1 | Contig378.g5078 | LRR receptor-like serine threonine-protein kinase | 0.04 | OrthoFinder | |
| Sro320_g116550.1 | Contig3665.g28316 | Leucine Rich Repeat | 0.04 | OrthoFinder | |
| Sro321_g116720.1 | Contig56.g428 | Leucine Rich Repeat | 0.03 | OrthoFinder | |
| Sro469_g149300.1 | Contig2361.g19380 | STYKc | 0.03 | OrthoFinder | |
| Sro526_g160530.1 | Contig842.g9298 | LRR receptor-like serine threonine-protein kinase | 0.03 | OrthoFinder | |
| Sro52_g030880.1 | Contig3190.g25171 | LRR receptor-like serine threonine-protein kinase | 0.03 | OrthoFinder | |
| Sro52_g031140.1 | Contig3190.g25197 | Leucine Rich Repeat | 0.03 | OrthoFinder | |
| Sro578_g169850.1 | Contig83.g894 | Leucine Rich Repeat | 0.04 | OrthoFinder | |
| Sro755_g197630.1 | Contig3465.g26898 | Leucine Rich Repeat | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEP | Enrichment |
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | Enrichment |
| MF | GO:0004112 | cyclic-nucleotide phosphodiesterase activity | IEP | Enrichment |
| MF | GO:0004114 | 3',5'-cyclic-nucleotide phosphodiesterase activity | IEP | Enrichment |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Enrichment |
| BP | GO:0006753 | nucleoside phosphate metabolic process | IEP | Enrichment |
| BP | GO:0006793 | phosphorus metabolic process | IEP | Enrichment |
| BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0007165 | signal transduction | IEP | Enrichment |
| MF | GO:0008081 | phosphoric diester hydrolase activity | IEP | Enrichment |
| BP | GO:0009117 | nucleotide metabolic process | IEP | Enrichment |
| BP | GO:0009165 | nucleotide biosynthetic process | IEP | Enrichment |
| BP | GO:0009187 | cyclic nucleotide metabolic process | IEP | Enrichment |
| BP | GO:0009190 | cyclic nucleotide biosynthetic process | IEP | Enrichment |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | Enrichment |
| BP | GO:0010468 | regulation of gene expression | IEP | Enrichment |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Enrichment |
| MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | Enrichment |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | Enrichment |
| CC | GO:0018995 | host cellular component | IEP | Enrichment |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0019222 | regulation of metabolic process | IEP | Enrichment |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | Enrichment |
| BP | GO:0019637 | organophosphate metabolic process | IEP | Enrichment |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | Enrichment |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Enrichment |
| CC | GO:0033643 | host cell part | IEP | Enrichment |
| CC | GO:0033646 | host intracellular part | IEP | Enrichment |
| CC | GO:0033647 | host intracellular organelle | IEP | Enrichment |
| CC | GO:0033648 | host intracellular membrane-bounded organelle | IEP | Enrichment |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | Enrichment |
| BP | GO:0035556 | intracellular signal transduction | IEP | Enrichment |
| CC | GO:0042025 | host cell nucleus | IEP | Enrichment |
| MF | GO:0042578 | phosphoric ester hydrolase activity | IEP | Enrichment |
| MF | GO:0043565 | sequence-specific DNA binding | IEP | Enrichment |
| BP | GO:0044249 | cellular biosynthetic process | IEP | Enrichment |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Enrichment |
| BP | GO:0044281 | small molecule metabolic process | IEP | Enrichment |
| BP | GO:0050789 | regulation of biological process | IEP | Enrichment |
| BP | GO:0050794 | regulation of cellular process | IEP | Enrichment |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | Enrichment |
| BP | GO:0055086 | nucleobase-containing small molecule metabolic process | IEP | Enrichment |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Enrichment |
| BP | GO:0065007 | biological regulation | IEP | Enrichment |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | Enrichment |
| BP | GO:0090407 | organophosphate biosynthetic process | IEP | Enrichment |
| MF | GO:0140110 | transcription regulator activity | IEP | Enrichment |
| BP | GO:1901293 | nucleoside phosphate biosynthetic process | IEP | Enrichment |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | Enrichment |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | Enrichment |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Enrichment |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Enrichment |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Enrichment |
No InterPro domains available for this sequence
| No external refs found! |