1. Home
  2. Species
  3. Seminavis robusta
  4. Sequence
  5. Sro2607_g332450.1

Sro2607_g332450.1 (Contig1442.g13260)


Aliases : Contig1442.g13260

Description : Leucine Rich Repeat


Gene families : OG_01_0000035 (OrthoFinder) Phylogenetic Tree(s): OG0000035_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro2607_g332450.1
Cluster HCCA: Cluster_325

Target Alias Description ECC score Gene Family Method Actions
Sro10_g008370.1 Contig1.g61 Leucine rich repeat 0.02 OrthoFinder
Sro1685_g291070.1 Contig3608.g27874 LRR receptor-like serine threonine-protein kinase 0.06 OrthoFinder
Sro1745_g294930.1 Contig2557.g20796 LRR receptor-like serine threonine-protein kinase 0.04 OrthoFinder
Sro181_g079000.1 Contig4257.g32227 LRR receptor-like serine threonine-protein kinase 0.03 OrthoFinder
Sro2223_g319710.1 Contig2179.g18196 Leucine Rich Repeat 0.03 OrthoFinder
Sro2273_g321510.1 Contig1841.g16144 Leucine Rich Repeat 0.04 OrthoFinder
Sro283_g107810.1 Contig4255.g32212 Leucine Rich Repeat 0.05 OrthoFinder
Sro283_g107820.1 Contig4255.g32213 LRR receptor-like serine threonine-protein kinase 0.03 OrthoFinder
Sro320_g116550.1 Contig3665.g28316 Leucine Rich Repeat 0.05 OrthoFinder
Sro321_g116720.1 Contig56.g428 Leucine Rich Repeat 0.05 OrthoFinder
Sro32_g020790.1 Contig3715.g28552 LRR receptor-like serine threonine-protein kinase At4g08850-like 0.05 OrthoFinder
Sro32_g020820.1 Contig3715.g28555 LRR receptor-like serine threonine-protein kinase At4g08850-like 0.07 OrthoFinder
Sro895_g217150.1 Contig1937.g16657 Leucine Rich Repeat 0.05 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0005216 ion channel activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
BP GO:0006820 anion transport IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
MF GO:0008509 anion transmembrane transporter activity IEP Enrichment
MF GO:0015075 ion transmembrane transporter activity IEP Enrichment
MF GO:0015098 molybdate ion transmembrane transporter activity IEP Enrichment
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
MF GO:0015276 ligand-gated ion channel activity IEP Enrichment
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Enrichment
BP GO:0015689 molybdate ion transport IEP Enrichment
BP GO:0015698 inorganic anion transport IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
MF GO:0022834 ligand-gated channel activity IEP Enrichment
MF GO:0022836 gated channel activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
BP GO:0035556 intracellular signal transduction IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment

No InterPro domains available for this sequence

No external refs found!