1. Home
  2. Species
  3. Seminavis robusta
  4. Sequence
  5. Sro254_g100080.1

Sro254_g100080.1 (Contig387.g5203)


Aliases : Contig387.g5203

Description : Plasminogen (Fragment)


Gene families : OG_01_0000055 (OrthoFinder) Phylogenetic Tree(s): OG0000055_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro254_g100080.1
Cluster HCCA: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
Sro1038_g234290.1 Contig4312.g32523 Coagulation factor IX (Fragment) 0.04 OrthoFinder
Sro10_g008240.1 Contig1.g48 Plasminogen (Fragment) 0.03 OrthoFinder
Sro191_g082050.1 Contig2614.g21198 Venom serine protease 0.05 OrthoFinder
Sro53_g031260.1 Contig1592.g14466 Chymotrypsin-like elastase family member 1 0.03 OrthoFinder
Sro720_g192520.1 Contig2421.g19813 Trypsin delta/gamma-like protein CG30031 0.03 OrthoFinder
SymbC1.scaffold1383.3 1383.3 Serine proteases, trypsin domain [Interproscan]. 0.02 OrthoFinder
SymbC1.scaffold687.3 687.3 Serine proteases, trypsin domain [Interproscan]. 0.02 OrthoFinder
SymbC1.scaffold7277.1 7277.1 Serine proteases, trypsin domain [Interproscan]. 0.01 OrthoFinder
Transcript_contig_57460 57460 Serine proteases, trypsin domain [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEA Interproscan
BP GO:0006508 proteolysis IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0006897 endocytosis IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
BP GO:0016310 phosphorylation IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR001254 Trypsin_dom 46 257
No external refs found!