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  5. Sro246_g097830.1

Sro246_g097830.1 (Contig171.g1967)


Aliases : Contig171.g1967

Description : Tubulin beta-2 chain (Fragment)


Gene families : OG_01_0001157 (OrthoFinder) Phylogenetic Tree(s): OG0001157_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro246_g097830.1
Cluster HCCA: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
Cz07g32070.t1 No alias Tubulin/FtsZ, 2-layer sandwich domain; Tubulin/FtsZ,... 0.03 OrthoFinder
EOD18865 No alias Tubulin/FtsZ, 2-layer sandwich domain; Tubulin/FtsZ,... 0.02 OrthoFinder
EOD26804 No alias Tubulin/FtsZ, 2-layer sandwich domain; Tubulin/FtsZ,... 0.02 OrthoFinder
OT_01G02190.1 No alias Tubulin/FtsZ, 2-layer sandwich domain; Tubulin/FtsZ,... 0.02 OrthoFinder
PTI_11G02750.1 No alias Tubulin/FtsZ, 2-layer sandwich domain; Tubulin/FtsZ,... 0.04 OrthoFinder
SymbC1.scaffold576.2 576.2 Tubulin/FtsZ, GTPase domain; Tubulin/FtsZ, 2-layer... 0.02 OrthoFinder
TP01G08660.1 No alias Tubulin/FtsZ, 2-layer sandwich domain; Tubulin/FtsZ,... 0.03 OrthoFinder
Transcript_contig_68823 68823 Tubulin/FtsZ, 2-layer sandwich domain; Tubulin/FtsZ,... 0.01 OrthoFinder
lcl|BLLF01002468.1_cds_GFH24185.1_18662 HaLaN_21930, GFH24185 Tubulin beta chain 0.01 OrthoFinder
lcl|LHPG02000014.1_cds_PRW39078.1_2757 PRW39078 Tubulin beta chain 0.02 OrthoFinder
lcl|VRMN01000011.1_cds_KAA8491961.1_4969 KAA8491961 Tubulin beta-1 chain 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003896 DNA primase activity IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0004576 oligosaccharyl transferase activity IEP Enrichment
MF GO:0004594 pantothenate kinase activity IEP Enrichment
MF GO:0005092 GDP-dissociation inhibitor activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
BP GO:0006269 DNA replication, synthesis of RNA primer IEP Enrichment
BP GO:0006694 steroid biosynthetic process IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
BP GO:0007264 small GTPase mediated signal transduction IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
BP GO:0008202 steroid metabolic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
CC GO:0030117 membrane coat IEP Enrichment
CC GO:0030118 clathrin coat IEP Enrichment
CC GO:0030119 AP-type membrane coat adaptor complex IEP Enrichment
CC GO:0030120 vesicle coat IEP Enrichment
CC GO:0030125 clathrin vesicle coat IEP Enrichment
CC GO:0030126 COPI vesicle coat IEP Enrichment
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Enrichment
CC GO:0030131 clathrin adaptor complex IEP Enrichment
CC GO:0030132 clathrin coat of coated pit IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
BP GO:0070070 proton-transporting V-type ATPase complex assembly IEP Enrichment
BP GO:0070071 proton-transporting two-sector ATPase complex assembly IEP Enrichment
BP GO:0070072 vacuolar proton-transporting V-type ATPase complex assembly IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
CC GO:0098797 plasma membrane protein complex IEP Enrichment
InterPro domains Description Start Stop
IPR003008 Tubulin_FtsZ_GTPase 3 211
IPR018316 Tubulin/FtsZ_2-layer-sand-dom 261 381
No external refs found!