1. Home
  2. Species
  3. Seminavis robusta
  4. Sequence
  5. Sro245_g097591.1

Sro245_g097591.1


Description : Helicase-associated [Interproscan].


Gene families : OG_01_0000030 (OrthoFinder) Phylogenetic Tree(s): OG0000030_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro245_g097591.1
Cluster HCCA: Cluster_290

Target Alias Description ECC score Gene Family Method Actions
Sro147_g067740.1 Contig246.g2997 Helicase 0.02 OrthoFinder
Sro154_g070010.1 Contig2716.g21879 Helicase-associated [Interproscan]. 0.03 OrthoFinder
Sro1568_g283060.1 Contig717.g8279 Helicase 0.03 OrthoFinder
Sro1798_g298280.1 Contig1745.g15542 Helicase 0.03 OrthoFinder
Sro1927_g305950.1 Contig136.g1514 Helicase 0.03 OrthoFinder
Sro351_g123860.1 Contig4381.g32940 Helicase 0.03 OrthoFinder
Sro472_g149930.1 Contig4323.g32608 Helicase 0.04 OrthoFinder
Sro549_g164590.1 Contig1749.g15564 Helicase 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004888 transmembrane signaling receptor activity IEP Enrichment
MF GO:0004930 G protein-coupled receptor activity IEP Enrichment
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Enrichment
BP GO:0006629 lipid metabolic process IEP Enrichment
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Enrichment
MF GO:0008484 sulfuric ester hydrolase activity IEP Enrichment
MF GO:0015276 ligand-gated ion channel activity IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Enrichment
MF GO:0022834 ligand-gated channel activity IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
MF GO:0038023 signaling receptor activity IEP Enrichment
MF GO:0060089 molecular transducer activity IEP Enrichment
InterPro domains Description Start Stop
IPR005114 Helicase_assoc 25 83
No external refs found!