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  5. Sro245_g097360.1

Sro245_g097360.1 (Contig3087.g24607)


Aliases : Contig3087.g24607

Description : Photosystem II


Gene families : OG_01_0004065 (OrthoFinder) Phylogenetic Tree(s): OG0004065_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro245_g097360.1
Cluster HCCA: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
Cre05.g243800 30783447, CPLD45 Photosynthesis.photophosphorylation.photosystem... 0.05 OrthoFinder
Dusal.0809s00001.1 33193197 Photosystem II Pbs27 [Interproscan]. 0.02 OrthoFinder
EOD15678 No alias Photosystem II Pbs27 [Interproscan]. 0.06 OrthoFinder
PTI_01G04750.1 No alias Photosystem II Pbs27 [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold462.13 462.13 Photosystem II Pbs27 [Interproscan]. 0.01 OrthoFinder
TP03G02000.1 No alias Photosystem II Pbs27 [Interproscan]. 0.04 OrthoFinder
XM_002508021.1 MICPUN_91519, 91519 Photosystem II Pbs27 [Interproscan]. 0.06 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0010207 photosystem II assembly IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0003333 amino acid transmembrane transport IEP Enrichment
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Enrichment
MF GO:0004222 metalloendopeptidase activity IEP Enrichment
MF GO:0004527 exonuclease activity IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
BP GO:0006813 potassium ion transport IEP Enrichment
BP GO:0006865 amino acid transport IEP Enrichment
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Enrichment
MF GO:0008237 metallopeptidase activity IEP Enrichment
MF GO:0008408 3'-5' exonuclease activity IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
CC GO:0009521 photosystem IEP Enrichment
CC GO:0009523 photosystem II IEP Enrichment
CC GO:0009654 photosystem II oxygen evolving complex IEP Enrichment
BP GO:0015849 organic acid transport IEP Enrichment
BP GO:0015979 photosynthesis IEP Enrichment
MF GO:0016209 antioxidant activity IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Enrichment
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016859 cis-trans isomerase activity IEP Enrichment
BP GO:0017038 protein import IEP Enrichment
CC GO:0019898 extrinsic component of membrane IEP Enrichment
MF GO:0050660 flavin adenine dinucleotide binding IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
MF GO:0071949 FAD binding IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
BP GO:1903825 organic acid transmembrane transport IEP Enrichment
BP GO:1905039 carboxylic acid transmembrane transport IEP Enrichment
CC GO:1990204 oxidoreductase complex IEP Enrichment
InterPro domains Description Start Stop
IPR025585 PSII_Pbs27 31 172
No external refs found!