Sro2403_g326410.1 (Contig1134.g10895)

Aliases : Contig1134.g10895

Description : U-box domain-containing protein

Gene families : OG_01_0000010 (OrthoFinder) Phylogenetic Tree(s): OG0000010_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sro2403_g326410.1
Cluster	HCCA: Cluster_267

Target	Alias	Description	ECC score	Gene Family Method
EOD04980	No alias	U box domain [Interproscan].	0.01	OrthoFinder
Sro1514_g278930.1	Contig2561.g20813	Putative E3 ubiquitin-protein ligase LIN	0.03	OrthoFinder
Sro15_g010940.1	Contig791.g8820	Putative E3 ubiquitin-protein ligase LIN	0.04	OrthoFinder
Sro214_g088770.1	Contig282.g3662	Putative E3 ubiquitin-protein ligase LIN	0.03	OrthoFinder
Sro877_g214590.1	Contig139.g1540	Putative E3 ubiquitin-protein ligase LIN	0.02	OrthoFinder
Sro920_g220220.1	Contig2508.g20522	Putative E3 ubiquitin-protein ligase LIN	0.05	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IEA	Interproscan
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016567	protein ubiquitination	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0008270	zinc ion binding	IEP	Enrichment
CC	GO:0009523	photosystem II	IEP	Enrichment
CC	GO:0009654	photosystem II oxygen evolving complex	IEP	Enrichment
BP	GO:0010109	regulation of photosynthesis	IEP	Enrichment
BP	GO:0019222	regulation of metabolic process	IEP	Enrichment
CC	GO:0019898	extrinsic component of membrane	IEP	Enrichment
BP	GO:0031323	regulation of cellular metabolic process	IEP	Enrichment
BP	GO:0042548	regulation of photosynthesis, light reaction	IEP	Enrichment
BP	GO:0042549	photosystem II stabilization	IEP	Enrichment
BP	GO:0043467	regulation of generation of precursor metabolites and energy	IEP	Enrichment
CC	GO:1990204	oxidoreductase complex	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR003613	Ubox_domain	6	78

External Links

No external refs found!