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  5. Sro2384_g325690.1

Sro2384_g325690.1 (Contig2856.g22895)


Aliases : Contig2856.g22895

Description : Extracellular solute-binding protein


Gene families : OG_01_0000402 (OrthoFinder) Phylogenetic Tree(s): OG0000402_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro2384_g325690.1
Cluster HCCA: Cluster_209

Target Alias Description ECC score Gene Family Method Actions
Sro1067_g237390.1 Contig2309.g19054 Putative amino-acid ABC transporter-binding protein YhdW 0.04 OrthoFinder
Sro1411_g270440.1 Contig2736.g22026 Extracellular solute-binding protein 0.02 OrthoFinder
Sro159_g071780.1 Contig500.g6718 Extracellular solute-binding protein 0.03 OrthoFinder
Sro159_g071820.1 Contig500.g6722 Extracellular solute-binding protein 0.03 OrthoFinder
Sro1903_g304520.1 Contig4361.g32859 Putative amino-acid ABC transporter-binding protein YhdW 0.02 OrthoFinder
Sro1920_g305520.1 Contig2527.g20644 Extracellular solute-binding protein 0.03 OrthoFinder
Sro2307_g322760.1 Contig1768.g15637 Putative amino-acid ABC transporter-binding protein YhdW 0.05 OrthoFinder
Sro238_g095580.1 Contig99.g1204 Extracellular solute-binding protein 0.02 OrthoFinder
Sro3494_g348610.1 Contig3168.g25076 Extracellular solute-binding protein 0.03 OrthoFinder
Sro474_g150180.1 Contig2775.g22314 Putative amino-acid ABC transporter-binding protein YhdW 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004109 coproporphyrinogen oxidase activity IEP Enrichment
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Enrichment
BP GO:0006753 nucleoside phosphate metabolic process IEP Enrichment
BP GO:0006778 porphyrin-containing compound metabolic process IEP Enrichment
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Enrichment
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0006796 phosphate-containing compound metabolic process IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
MF GO:0008410 CoA-transferase activity IEP Enrichment
BP GO:0009117 nucleotide metabolic process IEP Enrichment
BP GO:0009165 nucleotide biosynthetic process IEP Enrichment
BP GO:0009187 cyclic nucleotide metabolic process IEP Enrichment
BP GO:0009190 cyclic nucleotide biosynthetic process IEP Enrichment
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Enrichment
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Enrichment
BP GO:0018130 heterocycle biosynthetic process IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
BP GO:0019637 organophosphate metabolic process IEP Enrichment
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
MF GO:0050660 flavin adenine dinucleotide binding IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
MF GO:0071949 FAD binding IEP Enrichment
BP GO:0090407 organophosphate biosynthetic process IEP Enrichment
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR001638 Solute-binding_3/MltF_N 578 679
IPR001638 Solute-binding_3/MltF_N 247 480
No external refs found!