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  5. Sro2374_g325320.1

Sro2374_g325320.1 (Contig2298.g19021)


Aliases : Contig2298.g19021

Description : Peroxide stress-activated histidine kinase mak2


Gene families : OG_01_0000006 (OrthoFinder) Phylogenetic Tree(s): OG0000006_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro2374_g325320.1
Cluster HCCA: Cluster_178

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000042.236 tig00000042_g15634.t1 Probable histidine kinase 3 OS=Oryza sativa subsp. indica 0.01 OrthoFinder
Cpa|evm.model.tig00000325.13 tig00000325_g24095.t1 Ethylene receptor 2 OS=Solanum lycopersicum 0.01 OrthoFinder
Cpa|evm.model.tig00020904.27 tig00020904_g15159.t1 No description available 0.02 OrthoFinder
Dusal.0319s00003.1 33201934 Archaeal/bacterial/fungal rhodopsins; Histidine... 0.03 OrthoFinder
Dusal.0607s00010.1 33187794 Signal transduction response regulator, receiver domain... 0.01 OrthoFinder
Dusal.0675s00001.1 33202443 Histidine kinase/HSP90-like ATPase [Interproscan]. 0.03 OrthoFinder
Dusal.0675s00003.1 33202441 Archaeal/bacterial/fungal rhodopsins [Interproscan]. 0.01 OrthoFinder
OT_01G06340.1 No alias Signal transduction response regulator, receiver domain... 0.03 OrthoFinder
OT_09G02140.1 No alias Histidine kinase/HSP90-like ATPase; PAS domain; Signal... 0.03 OrthoFinder
SymbC1.scaffold733.8 733.8 PAS fold; Histidine kinase/HSP90-like ATPase; Signal... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEA Interproscan
BP GO:0000160 phosphorelay signal transduction system IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
BP GO:0007165 signal transduction IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003847 1-alkyl-2-acetylglycerophosphocholine esterase activity IEP Enrichment
MF GO:0008519 ammonium transmembrane transporter activity IEP Enrichment
BP GO:0015696 ammonium transport IEP Enrichment
BP GO:0016042 lipid catabolic process IEP Enrichment
MF GO:0052689 carboxylic ester hydrolase activity IEP Enrichment
InterPro domains Description Start Stop
IPR003661 HisK_dim/P 309 373
IPR013767 PAS_fold 174 285
IPR013767 PAS_fold 52 164
IPR001789 Sig_transdc_resp-reg_receiver 771 891
IPR001789 Sig_transdc_resp-reg_receiver 938 1056
IPR001789 Sig_transdc_resp-reg_receiver 588 702
IPR003594 HATPase_C 420 559
No external refs found!