1. Home
  2. Species
  3. Seminavis robusta
  4. Sequence
  5. Sro231_g093540.1

Sro231_g093540.1 (Contig3051.g24267)


Aliases : Contig3051.g24267

Description : Vacuolar transporter chaperone 4


Gene families : OG_01_0000237 (OrthoFinder) Phylogenetic Tree(s): OG0000237_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro231_g093540.1
Cluster HCCA: Cluster_341

Target Alias Description ECC score Gene Family Method Actions
EOD08811 No alias VTC domain; SPX domain [Interproscan]. 0.02 OrthoFinder
EOD29231 No alias VTC domain; Domain of unknown function DUF202 [Interproscan]. 0.02 OrthoFinder
TP22G02580.1 No alias Telomeric single stranded DNA binding POT1/Cdc13 [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000020.1_cds_PRW20996.1_4880 PRW20996 Vacuolar transporter chaperone 2 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
BP GO:0016485 protein processing IEP Enrichment
BP GO:0016540 protein autoprocessing IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
MF GO:0031683 G-protein beta/gamma-subunit complex binding IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
MF GO:0044877 protein-containing complex binding IEP Enrichment
BP GO:0051604 protein maturation IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR018966 VTC_domain 253 531
IPR003807 DUF202 688 753
No external refs found!