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  5. Sro2273_g321540.1

Sro2273_g321540.1 (Contig1841.g16147)


Aliases : Contig1841.g16147

Description : NMDA receptor subtype of glutamate-gated ion channels with high calcium permeability and voltage-dependent sensitivity to magnesium. Mediated by glycine. This protein plays a key role in synaptic plasticity


Gene families : OG_01_0001858 (OrthoFinder) Phylogenetic Tree(s): OG0001858_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro2273_g321540.1

Target Alias Description ECC score Gene Family Method Actions
Dusal.0139s00028.1 33194193 Solute-binding protein family 3/N-terminal domain of... 0.05 OrthoFinder
Dusal.0322s00017.1 33197812 Ionotropic glutamate receptor [Interproscan]. 0.03 OrthoFinder
Dusal.0421s00009.1 33198735 Solute-binding protein family 3/N-terminal domain of... 0.03 OrthoFinder
Sro106_g053580.1 Contig1122.g10755 Receptor subunit 1 0.01 OrthoFinder
Sro923_g220690.1 Contig4194.g31937 Receptor subunit 1 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0015276 ligand-gated ion channel activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Enrichment
BP GO:0000160 phosphorelay signal transduction system IEP Enrichment
MF GO:0004673 protein histidine kinase activity IEP Enrichment
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Enrichment
MF GO:0140299 small molecule sensor activity IEP Enrichment
InterPro domains Description Start Stop
IPR001320 Iontro_rcpt 199 506
No external refs found!