1. Home
  2. Species
  3. Seminavis robusta
  4. Sequence
  5. Sro2188_g318220.1

Sro2188_g318220.1 (Contig1334.g12296)


Aliases : Contig1334.g12296

Description : Sensor kinase/phosphatase LuxQ


Gene families : OG_01_0001328 (OrthoFinder) Phylogenetic Tree(s): OG0001328_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro2188_g318220.1
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
Sro1060_g236670.1 Contig1660.g14960 Sensor kinase/phosphatase LuxQ 0.03 OrthoFinder
Sro12_g009250.1 Contig2293.g18945 Sensor protein kinase WalK (Fragment) 0.03 OrthoFinder
Sro1725_g293770.1 Contig690.g8080 Sensor kinase/phosphatase LuxQ 0.04 OrthoFinder
Sro363_g126940.1 Contig698.g8133 Sensor kinase/phosphatase LuxQ 0.04 OrthoFinder
Sro915_g219740.1 Contig3226.g25524 Sensor kinase/phosphatase LuxQ 0.03 OrthoFinder
Sro96_g049610.1 Contig3763.g28887 Respiration control sensor protein ArcB 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEA Interproscan
BP GO:0000160 phosphorelay signal transduction system IEA Interproscan
BP GO:0007165 signal transduction IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP Enrichment
BP GO:0006355 regulation of transcription, DNA-templated IEP Enrichment
BP GO:0009314 response to radiation IEP Enrichment
BP GO:0009416 response to light stimulus IEP Enrichment
BP GO:0009581 detection of external stimulus IEP Enrichment
BP GO:0009582 detection of abiotic stimulus IEP Enrichment
BP GO:0009583 detection of light stimulus IEP Enrichment
BP GO:0009584 detection of visible light IEP Enrichment
BP GO:0009605 response to external stimulus IEP Enrichment
BP GO:0009628 response to abiotic stimulus IEP Enrichment
BP GO:0009889 regulation of biosynthetic process IEP Enrichment
MF GO:0009916 alternative oxidase activity IEP Enrichment
BP GO:0010468 regulation of gene expression IEP Enrichment
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Enrichment
BP GO:0015708 silicic acid import across plasma membrane IEP Enrichment
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Enrichment
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Enrichment
BP GO:0018298 protein-chromophore linkage IEP Enrichment
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0019222 regulation of metabolic process IEP Enrichment
BP GO:0031323 regulation of cellular metabolic process IEP Enrichment
BP GO:0031326 regulation of cellular biosynthetic process IEP Enrichment
MF GO:0046983 protein dimerization activity IEP Enrichment
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051252 regulation of RNA metabolic process IEP Enrichment
BP GO:0051606 detection of stimulus IEP Enrichment
BP GO:0060255 regulation of macromolecule metabolic process IEP Enrichment
BP GO:0080090 regulation of primary metabolic process IEP Enrichment
BP GO:0098656 anion transmembrane transport IEP Enrichment
BP GO:0098657 import into cell IEP Enrichment
BP GO:0098661 inorganic anion transmembrane transport IEP Enrichment
BP GO:0098739 import across plasma membrane IEP Enrichment
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Enrichment
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Enrichment
BP GO:2001141 regulation of RNA biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR001789 Sig_transdc_resp-reg_receiver 969 1088
IPR001789 Sig_transdc_resp-reg_receiver 1164 1283
IPR003661 HisK_dim/P 517 612
IPR003594 HATPase_C 686 853
No external refs found!