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Aliases : Contig3432.g26733
Description : Multisite-specific tRNA:(cytosine-C(5))-methyltransferase trm4b
Gene families : OG_01_0000532 (OrthoFinder) Phylogenetic Tree(s): OG0000532_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Sro2129_g315780.1 | |
| Cluster | HCCA: Cluster_166 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| XM_002500182.1 | MICPUN_79216, 79216 | SAM-dependent methyltransferase RsmB/NOP2-type [Interproscan]. | 0.01 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008168 | methyltransferase activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | Enrichment |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | Enrichment |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | Enrichment |
| MF | GO:0005337 | nucleoside transmembrane transporter activity | IEP | Enrichment |
| CC | GO:0005681 | spliceosomal complex | IEP | Enrichment |
| BP | GO:0008380 | RNA splicing | IEP | Enrichment |
| BP | GO:0010921 | regulation of phosphatase activity | IEP | Enrichment |
| BP | GO:0015858 | nucleoside transport | IEP | Enrichment |
| MF | GO:0016670 | oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor | IEP | Enrichment |
| MF | GO:0016972 | thiol oxidase activity | IEP | Enrichment |
| BP | GO:0019220 | regulation of phosphate metabolic process | IEP | Enrichment |
| BP | GO:0031399 | regulation of protein modification process | IEP | Enrichment |
| BP | GO:0032268 | regulation of cellular protein metabolic process | IEP | Enrichment |
| BP | GO:0035303 | regulation of dephosphorylation | IEP | Enrichment |
| BP | GO:0035304 | regulation of protein dephosphorylation | IEP | Enrichment |
| BP | GO:0043666 | regulation of phosphoprotein phosphatase activity | IEP | Enrichment |
| BP | GO:0050790 | regulation of catalytic activity | IEP | Enrichment |
| BP | GO:0051174 | regulation of phosphorus metabolic process | IEP | Enrichment |
| BP | GO:0051246 | regulation of protein metabolic process | IEP | Enrichment |
| BP | GO:0051336 | regulation of hydrolase activity | IEP | Enrichment |
| BP | GO:0065009 | regulation of molecular function | IEP | Enrichment |
| BP | GO:1901264 | carbohydrate derivative transport | IEP | Enrichment |
| BP | GO:1901642 | nucleoside transmembrane transport | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001678 | MeTrfase_RsmB/NOP2 | 288 | 464 |
| No external refs found! |