Aliases : Contig3983.g30612
Description : Dependent RNA helicase
Gene families : OG_01_0001367 (OrthoFinder) Phylogenetic Tree(s): OG0001367_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Sro2115_g315160.1 | |
Cluster | HCCA: Cluster_97 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cpa|evm.model.tig00020544.5 | tig00020544_g10485.t2 | DEAD-box ATP-dependent RNA helicase 37 OS=Oryza sativa... | 0.06 | OrthoFinder | |
Cre10.g427700 | 30790252 | DEAD-box ATP-dependent RNA helicase 52B OS=Oryza sativa... | 0.04 | OrthoFinder | |
OT_04G05300.1 | No alias | Helicase, C-terminal; DEAD/DEAH box helicase domain... | 0.03 | OrthoFinder | |
TP09G02940.1 | No alias | Helicase, C-terminal; DEAD/DEAH box helicase domain... | 0.07 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
MF | GO:0005524 | ATP binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003723 | RNA binding | IEP | Enrichment |
MF | GO:0003743 | translation initiation factor activity | IEP | Enrichment |
MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | Enrichment |
MF | GO:0005515 | protein binding | IEP | Enrichment |
CC | GO:0005737 | cytoplasm | IEP | Enrichment |
CC | GO:0005741 | mitochondrial outer membrane | IEP | Enrichment |
CC | GO:0005852 | eukaryotic translation initiation factor 3 complex | IEP | Enrichment |
BP | GO:0006364 | rRNA processing | IEP | Enrichment |
BP | GO:0006413 | translational initiation | IEP | Enrichment |
BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | Enrichment |
MF | GO:0008135 | translation factor activity, RNA binding | IEP | Enrichment |
MF | GO:0010181 | FMN binding | IEP | Enrichment |
BP | GO:0016070 | RNA metabolic process | IEP | Enrichment |
BP | GO:0016072 | rRNA metabolic process | IEP | Enrichment |
MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | Enrichment |
CC | GO:0019867 | outer membrane | IEP | Enrichment |
MF | GO:0031072 | heat shock protein binding | IEP | Enrichment |
CC | GO:0031090 | organelle membrane | IEP | Enrichment |
MF | GO:0031369 | translation initiation factor binding | IEP | Enrichment |
CC | GO:0031966 | mitochondrial membrane | IEP | Enrichment |
CC | GO:0031968 | organelle outer membrane | IEP | Enrichment |
CC | GO:0032991 | protein-containing complex | IEP | Enrichment |
BP | GO:0034660 | ncRNA metabolic process | IEP | Enrichment |
BP | GO:0043038 | amino acid activation | IEP | Enrichment |
BP | GO:0043039 | tRNA aminoacylation | IEP | Enrichment |
MF | GO:0045182 | translation regulator activity | IEP | Enrichment |
MF | GO:0051082 | unfolded protein binding | IEP | Enrichment |
MF | GO:0051536 | iron-sulfur cluster binding | IEP | Enrichment |
MF | GO:0051540 | metal cluster binding | IEP | Enrichment |
MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | Enrichment |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Enrichment |
CC | GO:0098588 | bounding membrane of organelle | IEP | Enrichment |
No external refs found! |