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  5. Sro204_g085790.1

Sro204_g085790.1 (Contig1096.g10609)


Aliases : Contig1096.g10609

Description : PsbP-like protein


Gene families : OG_01_0004166 (OrthoFinder) Phylogenetic Tree(s): OG0004166_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro204_g085790.1
Cluster HCCA: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001408.6 tig00001408_g8601.t1 No description available 0.01 OrthoFinder
Cre12.g509050 30791680, PSBP3 Photosynthesis.photophosphorylation.photosystem... 0.03 OrthoFinder
Cz02g18040.t1 No alias PsbP, C-terminal [Interproscan]. 0.04 OrthoFinder
PTI_17G01030.1 No alias PsbP, C-terminal [Interproscan]. 0.02 OrthoFinder
XM_002500052.1 MICPUN_107741, 107741 Thylakoid lumenal 25.6kDa protein like, chloroplast precursor 0.05 OrthoFinder
XM_003057786.1 MicpuC2_57449, 57449 PsbP, C-terminal [Interproscan]. 0.03 OrthoFinder
lcl|BLLF01000477.1_cds_GFH12203.1_6680 HaLaN_07842, GFH12203 Chloroplast oxygen-evolving complex/thylakoid lumenal... 0.01 OrthoFinder
lcl|LHPG02000012.1_cds_PRW44867.1_1794 PRW44867 PsbP chloroplastic 0.02 OrthoFinder
lcl|VRMN01000011.1_cds_KAA8491803.1_4811 KAA8491803 PsbP-like protein 1, chloroplastic 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
CC GO:0009523 photosystem II IEA Interproscan
CC GO:0009654 photosystem II oxygen evolving complex IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
CC GO:0019898 extrinsic component of membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004181 metallocarboxypeptidase activity IEP Enrichment
MF GO:0004222 metalloendopeptidase activity IEP Enrichment
MF GO:0004518 nuclease activity IEP Enrichment
MF GO:0004527 exonuclease activity IEP Enrichment
CC GO:0005886 plasma membrane IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006813 potassium ion transport IEP Enrichment
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008235 metalloexopeptidase activity IEP Enrichment
MF GO:0008237 metallopeptidase activity IEP Enrichment
MF GO:0008408 3'-5' exonuclease activity IEP Enrichment
BP GO:0010207 photosystem II assembly IEP Enrichment
MF GO:0016209 antioxidant activity IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Enrichment
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016859 cis-trans isomerase activity IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
MF GO:0022804 active transmembrane transporter activity IEP Enrichment
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
MF GO:0050660 flavin adenine dinucleotide binding IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
InterPro domains Description Start Stop
IPR002683 PsbP_C 74 213
No external refs found!