Sro200_g084620.1 (Contig201.g2353)


Aliases : Contig201.g2353

Description : Oligomycin resistance ATP-dependent permease YOR1


Gene families : OG_01_0000039 (OrthoFinder) Phylogenetic Tree(s): OG0000039_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro200_g084620.1
Cluster HCCA: Cluster_227

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000718.1 tig00000718_g3679.t1 ABC transporter C family member 2 OS=Arabidopsis thaliana 0.01 OrthoFinder
Cpa|evm.model.tig00000718.2 tig00000718_g3679.t1 ABC transporter C family member 2 OS=Arabidopsis thaliana 0.01 OrthoFinder
Cpa|evm.model.tig00000718.3 tig00000718_g3679.t1 ABC transporter C family member 6 OS=Arabidopsis thaliana 0.01 OrthoFinder
Cpa|evm.model.tig00001024.2 tig00001729_g9740.t1 ABC transporter C family member 14 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cpa|evm.model.tig00001729.6 tig00001729_g9740.t1 Solute transport.primary active transport.ABC... 0.01 OrthoFinder
Cpa|evm.model.tig00020592.4 tig00020592_g11633.t1 ABC transporter C family member 1 OS=Arabidopsis thaliana 0.01 OrthoFinder
Cpa|evm.model.tig00020723.5 tig00020723_g13424.t1 ABC transporter C family member 13 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cre04.g228650 30791460 Solute transport.primary active transport.ABC... 0.03 OrthoFinder
Cz01g21250.t1 No alias ABC transporter type 1, transmembrane domain; ABC... 0.02 OrthoFinder
EOD08599 No alias ABC transporter type 1, transmembrane domain; ABC... 0.04 OrthoFinder
EOD12092 No alias ABC transporter type 1, transmembrane domain; ABC... 0.03 OrthoFinder
EOD26066 No alias EF-hand domain; ABC transporter type 1, transmembrane... 0.02 OrthoFinder
EOD33714 No alias ABC transporter type 1, transmembrane domain; ABC... 0.03 OrthoFinder
Vocar.0008s0002.1 32897179 ABC transporter-like; ABC transporter type 1,... 0.01 OrthoFinder
XM_002508173.1 MICPUN_94915, 94915 ATP-binding cassette superfamily 0.01 OrthoFinder
lcl|BLLF01002022.1_cds_GFH22355.1_16832 HaLaN_19808, GFH22355 ABC transporter type 1, transmembrane domain [Interproscan]. 0.01 OrthoFinder
lcl|LHPG02000020.1_cds_PRW21108.1_4976 PRW21108 Multidrug resistance-associated 1 isoform X3 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004176 ATP-dependent peptidase activity IEP Enrichment
MF GO:0004357 glutamate-cysteine ligase activity IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
BP GO:0006575 cellular modified amino acid metabolic process IEP Enrichment
BP GO:0006749 glutathione metabolic process IEP Enrichment
BP GO:0006750 glutathione biosynthetic process IEP Enrichment
BP GO:0006790 sulfur compound metabolic process IEP Enrichment
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Enrichment
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Enrichment
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Enrichment
MF GO:0016881 acid-amino acid ligase activity IEP Enrichment
BP GO:0019184 nonribosomal peptide biosynthetic process IEP Enrichment
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0044272 sulfur compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR011527 ABC1_TM_dom 147 411
IPR011527 ABC1_TM_dom 810 1082
IPR003439 ABC_transporter-like_ATP-bd 526 661
IPR003439 ABC_transporter-like_ATP-bd 1156 1306
No external refs found!