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Aliases : Contig1011.g10144
Description : Leucine Rich Repeat
Gene families : OG_01_0000035 (OrthoFinder) Phylogenetic Tree(s): OG0000035_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Sro2000_g310250.1 | |
| Cluster | HCCA: Cluster_64 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Sro100_g051080.1 | Contig63.g513 | Leucine Rich Repeat | 0.05 | OrthoFinder | |
| Sro101_g051720.1 | Contig348.g4725 | LRR receptor-like serine threonine-protein kinase | 0.04 | OrthoFinder | |
| Sro1086_g239740.1 | Contig2506.g20510 | Leucine Rich Repeat | 0.01 | OrthoFinder | |
| Sro10_g008370.1 | Contig1.g61 | Leucine rich repeat | 0.04 | OrthoFinder | |
| Sro1126_g244030.1 | Contig1609.g14564 | LRR receptor-like serine threonine-protein kinase | 0.03 | OrthoFinder | |
| Sro1150_g246700.1 | Contig603.g7507 | Leucine Rich Repeat | 0.02 | OrthoFinder | |
| Sro1236_g255140.1 | Contig1374.g12617 | Leucine Rich Repeat | 0.05 | OrthoFinder | |
| Sro1331_g263500.1 | Contig1733.g15456 | LRR receptor-like serine threonine-protein kinase | 0.03 | OrthoFinder | |
| Sro1331_g263510.1 | Contig1733.g15457 | Leucine rich repeat N-terminal domain | 0.06 | OrthoFinder | |
| Sro144_g067010.1 | Contig3873.g29800 | LRR receptor-like serine threonine-protein kinase | 0.02 | OrthoFinder | |
| Sro1460_g274600.1 | Contig332.g4412 | Leucine Rich Repeat | 0.01 | OrthoFinder | |
| Sro1468_g275160.1 | Contig3834.g29482 | Leucine Rich Repeat | 0.04 | OrthoFinder | |
| Sro1543_g281120.1 | Contig1530.g13908 | Hypothetical protein | 0.04 | OrthoFinder | |
| Sro1581_g283800.1 | Contig585.g7355 | Leucine Rich Repeat | 0.03 | OrthoFinder | |
| Sro1685_g291070.1 | Contig3608.g27874 | LRR receptor-like serine threonine-protein kinase | 0.03 | OrthoFinder | |
| Sro1745_g294930.1 | Contig2557.g20796 | LRR receptor-like serine threonine-protein kinase | 0.02 | OrthoFinder | |
| Sro1781_g297090.1 | Contig230.g2769 | Receptor-like protein kinase precursor | 0.04 | OrthoFinder | |
| Sro2116_g315190.1 | Contig1604.g14544 | LRR receptor-like serine threonine-protein kinase | 0.03 | OrthoFinder | |
| Sro2158_g316930.1 | Contig3584.g27687 | Leucine Rich Repeat | 0.02 | OrthoFinder | |
| Sro2158_g316940.1 | Contig3584.g27688 | Leucine Rich Repeat | 0.03 | OrthoFinder | |
| Sro242_g096620.1 | Contig554.g7080 | Leucine Rich Repeat | 0.05 | OrthoFinder | |
| Sro24_g016630.1 | Contig40.g273 | Leucine Rich Repeat | 0.03 | OrthoFinder | |
| Sro255_g100350.1 | Contig2336.g19212 | Leucine Rich Repeat | 0.05 | OrthoFinder | |
| Sro273_g105050.1 | Contig4205.g31986 | LRR receptor-like serine threonine-protein kinase | 0.04 | OrthoFinder | |
| Sro283_g107800.1 | Contig4255.g32211 | Leucine Rich Repeat | 0.02 | OrthoFinder | |
| Sro283_g107810.1 | Contig4255.g32212 | Leucine Rich Repeat | 0.02 | OrthoFinder | |
| Sro321_g116720.1 | Contig56.g428 | Leucine Rich Repeat | 0.03 | OrthoFinder | |
| Sro322_g117050.1 | Contig1229.g11543 | LRR receptor-like serine threonine-protein kinase | 0.05 | OrthoFinder | |
| Sro32_g020780.1 | Contig3715.g28551 | Leucine Rich Repeat | 0.05 | OrthoFinder | |
| Sro32_g020790.1 | Contig3715.g28552 | LRR receptor-like serine threonine-protein kinase At4g08850-like | 0.02 | OrthoFinder | |
| Sro32_g020820.1 | Contig3715.g28555 | LRR receptor-like serine threonine-protein kinase At4g08850-like | 0.01 | OrthoFinder | |
| Sro337_g120550.1 | Contig2800.g22513 | STYKc | 0.02 | OrthoFinder | |
| Sro449_g145300.1 | Contig3482.g27000 | STYKc | 0.02 | OrthoFinder | |
| Sro449_g145320.1 | Contig3482.g27002 | Leucine Rich Repeat | 0.04 | OrthoFinder | |
| Sro45_g026870.1 | Contig2311.g19069 | Leucine Rich Repeat | 0.01 | OrthoFinder | |
| Sro460_g147480.1 | Contig3843.g29573 | Leucine Rich Repeat | 0.05 | OrthoFinder | |
| Sro469_g149290.1 | Contig2361.g19379 | Leucine Rich Repeat | 0.04 | OrthoFinder | |
| Sro52_g030930.1 | Contig3190.g25176 | LRR receptor-like serine threonine-protein kinase | 0.01 | OrthoFinder | |
| Sro52_g030940.1 | Contig3190.g25177 | Leucine Rich Repeat | 0.02 | OrthoFinder | |
| Sro52_g031070.1 | Contig3190.g25190 | Leucine Rich Repeat | 0.04 | OrthoFinder | |
| Sro548_g164490.1 | Contig1714.g15329 | LRR receptor-like serine threonine-protein kinase | 0.04 | OrthoFinder | |
| Sro558_g166320.1 | Contig3624.g28030 | Leucine Rich Repeat | 0.02 | OrthoFinder | |
| Sro573_g168940.1 | Contig1565.g14208 | Fibronectin leucine rich transmembrane protein 2 | 0.01 | OrthoFinder | |
| Sro638_g179650.1 | Contig628.g7628 | Leucine Rich Repeat | 0.03 | OrthoFinder | |
| Sro74_g040710.1 | Contig4700.g34933 | Leucine Rich Repeat | 0.04 | OrthoFinder | |
| Sro755_g197630.1 | Contig3465.g26898 | Leucine Rich Repeat | 0.01 | OrthoFinder | |
| Sro837_g209110.1 | Contig405.g5504 | Leucine Rich Repeat | 0.03 | OrthoFinder | |
| Sro86_g045610.1 | Contig2999.g23839 | Leucine Rich Repeat | 0.04 | OrthoFinder | |
| Sro970_g226320.1 | Contig1965.g16828 | Leucine Rich Repeat | 0.03 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000160 | phosphorelay signal transduction system | IEP | Enrichment |
| MF | GO:0003677 | DNA binding | IEP | Enrichment |
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | Enrichment |
| MF | GO:0003896 | DNA primase activity | IEP | Enrichment |
| MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | Enrichment |
| MF | GO:0004888 | transmembrane signaling receptor activity | IEP | Enrichment |
| MF | GO:0004930 | G protein-coupled receptor activity | IEP | Enrichment |
| BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Enrichment |
| BP | GO:0006753 | nucleoside phosphate metabolic process | IEP | Enrichment |
| BP | GO:0007165 | signal transduction | IEP | Enrichment |
| BP | GO:0007186 | G protein-coupled receptor signaling pathway | IEP | Enrichment |
| BP | GO:0009117 | nucleotide metabolic process | IEP | Enrichment |
| BP | GO:0009165 | nucleotide biosynthetic process | IEP | Enrichment |
| BP | GO:0009187 | cyclic nucleotide metabolic process | IEP | Enrichment |
| BP | GO:0009190 | cyclic nucleotide biosynthetic process | IEP | Enrichment |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | Enrichment |
| BP | GO:0010468 | regulation of gene expression | IEP | Enrichment |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Enrichment |
| CC | GO:0018995 | host cellular component | IEP | Enrichment |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0019222 | regulation of metabolic process | IEP | Enrichment |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | Enrichment |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Enrichment |
| CC | GO:0033643 | host cell part | IEP | Enrichment |
| CC | GO:0033646 | host intracellular part | IEP | Enrichment |
| CC | GO:0033647 | host intracellular organelle | IEP | Enrichment |
| CC | GO:0033648 | host intracellular membrane-bounded organelle | IEP | Enrichment |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | Enrichment |
| BP | GO:0035556 | intracellular signal transduction | IEP | Enrichment |
| MF | GO:0038023 | signaling receptor activity | IEP | Enrichment |
| CC | GO:0042025 | host cell nucleus | IEP | Enrichment |
| MF | GO:0043565 | sequence-specific DNA binding | IEP | Enrichment |
| BP | GO:0050789 | regulation of biological process | IEP | Enrichment |
| BP | GO:0050794 | regulation of cellular process | IEP | Enrichment |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | Enrichment |
| BP | GO:0055086 | nucleobase-containing small molecule metabolic process | IEP | Enrichment |
| MF | GO:0060089 | molecular transducer activity | IEP | Enrichment |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Enrichment |
| BP | GO:0065007 | biological regulation | IEP | Enrichment |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | Enrichment |
| BP | GO:0090407 | organophosphate biosynthetic process | IEP | Enrichment |
| MF | GO:0140110 | transcription regulator activity | IEP | Enrichment |
| BP | GO:1901293 | nucleoside phosphate biosynthetic process | IEP | Enrichment |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Enrichment |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Enrichment |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Enrichment |
No InterPro domains available for this sequence
| No external refs found! |