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  5. Sro1993_g309900.1

Sro1993_g309900.1 (Contig1033.g10269)


Aliases : Contig1033.g10269

Description : Polymerase epsilon subunit 2


Gene families : OG_01_0002782 (OrthoFinder) Phylogenetic Tree(s): OG0002782_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1993_g309900.1
Cluster HCCA: Cluster_246

Target Alias Description ECC score Gene Family Method Actions
Cre10.g424200 30790301 Cell cycle.interphase.DNA replication.elongation.DNA... 0.05 OrthoFinder
Cz01g27210.t1 No alias DNA polymerase alpha/delta/epsilon, subunit B [Interproscan]. 0.07 OrthoFinder
Dusal.0441s00004.1 33203005 DNA polymerase alpha/delta/epsilon, subunit B [Interproscan]. 0.03 OrthoFinder
OT_08G03700.1 No alias DNA polymerase alpha/delta/epsilon, subunit B [Interproscan]. 0.07 OrthoFinder
PTI_28G00760.1 No alias DNA polymerase alpha/delta/epsilon, subunit B [Interproscan]. 0.04 OrthoFinder
XM_002508249.1 MICPUN_101999, 101999 DNA polymerase alpha/delta/epsilon, subunit B [Interproscan]. 0.05 OrthoFinder
XM_003058935.1 MicpuC2_58339, 58339 DNA polymerase alpha/delta/epsilon, subunit B [Interproscan]. 0.06 OrthoFinder
lcl|VRMN01000008.1_cds_KAA8492965.1_2701 KAA8492965 DNA polymerase epsilon subunit B 0.05 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006260 DNA replication IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000030 mannosyltransferase activity IEP Enrichment
MF GO:0003887 DNA-directed DNA polymerase activity IEP Enrichment
MF GO:0003896 DNA primase activity IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0004576 oligosaccharyl transferase activity IEP Enrichment
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006269 DNA replication, synthesis of RNA primer IEP Enrichment
BP GO:0006270 DNA replication initiation IEP Enrichment
BP GO:0006275 regulation of DNA replication IEP Enrichment
BP GO:0006310 DNA recombination IEP Enrichment
BP GO:0006486 protein glycosylation IEP Enrichment
BP GO:0007062 sister chromatid cohesion IEP Enrichment
BP GO:0007064 mitotic sister chromatid cohesion IEP Enrichment
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Enrichment
MF GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016757 glycosyltransferase activity IEP Enrichment
MF GO:0016758 hexosyltransferase activity IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
BP GO:0022402 cell cycle process IEP Enrichment
CC GO:0031390 Ctf18 RFC-like complex IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
MF GO:0034061 DNA polymerase activity IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
CC GO:0042575 DNA polymerase complex IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0043413 macromolecule glycosylation IEP Enrichment
CC GO:0043625 delta DNA polymerase complex IEP Enrichment
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Enrichment
MF GO:0061731 ribonucleoside-diphosphate reductase activity IEP Enrichment
BP GO:0070085 glycosylation IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
BP GO:1903047 mitotic cell cycle process IEP Enrichment
CC GO:1990234 transferase complex IEP Enrichment
InterPro domains Description Start Stop
IPR007185 DNA_pol_a/d/e_bsu 269 465
No external refs found!