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  5. Sro193_g082560.1

Sro193_g082560.1 (Contig826.g9155)


Aliases : Contig826.g9155

Description : D-alanine--D-alanyl carrier protein ligase


Gene families : OG_01_0000117 (OrthoFinder) Phylogenetic Tree(s): OG0000117_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro193_g082560.1
Cluster HCCA: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
Sro1066_g237320.1 Contig1437.g13208 D-alanine--D-alanyl carrier protein ligase 0.04 OrthoFinder
Sro1710_g292770.1 Contig1549.g14083 D-alanine--D-alanyl carrier protein ligase 0.02 OrthoFinder
Sro193_g082620.1 Contig826.g9161 Hypothetical protein 0.04 OrthoFinder
Sro329_g118780.1 Contig2017.g17248 D-alanine--D-alanyl carrier protein ligase 0.03 OrthoFinder
Sro571_g168700.1 Contig3541.g27383 D-alanine--D-alanyl carrier protein ligase 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Enrichment
MF GO:0008234 cysteine-type peptidase activity IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
MF GO:0009982 pseudouridine synthase activity IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig 12 433
No external refs found!