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Aliases : Contig3488.g27070
Description : Dehydrogenase/reductase SDR family member on chromosome X homolog
Gene families : OG_01_0000065 (OrthoFinder) Phylogenetic Tree(s): OG0000065_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Sro190_g081950.1 | |
| Cluster | HCCA: Cluster_35 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00000227.39 | tig00000227_g19830.t1 | Short-chain dehydrogenase TIC 32, chloroplastic... | 0.02 | OrthoFinder | |
| Cpa|evm.model.tig00021073.18 | tig00021073_g18021.t1 | Short-chain dehydrogenase TIC 32, chloroplastic... | 0.01 | OrthoFinder | |
| Cre08.g375350 | 30773899 | Protochlorophyllide reductase A, chloroplastic OS=Oryza... | 0.02 | OrthoFinder | |
| Cre08.g375450 | 30773913 | Short-chain dehydrogenase TIC 32, chloroplastic... | 0.02 | OrthoFinder | |
| Cre09.g398252 | 30780830 | Short-chain dehydrogenase TIC 32, chloroplastic... | 0.06 | OrthoFinder | |
| Cz01g44190.t1 | No alias | Short-chain dehydrogenase/reductase SDR [Interproscan]. | 0.02 | OrthoFinder | |
| Cz02g02220.t1 | No alias | Short-chain dehydrogenase/reductase SDR [Interproscan]. | 0.01 | OrthoFinder | |
| Cz05g12090.t1 | No alias | Short-chain dehydrogenase/reductase SDR [Interproscan]. | 0.01 | OrthoFinder | |
| EOD12190 | No alias | Short-chain dehydrogenase/reductase SDR [Interproscan]. | 0.01 | OrthoFinder | |
| EOD18368 | No alias | Short-chain dehydrogenase/reductase SDR [Interproscan]. | 0.01 | OrthoFinder | |
| EOD37749 | No alias | Short-chain dehydrogenase/reductase SDR [Interproscan]. | 0.02 | OrthoFinder | |
| PTI_03G02450.1 | No alias | Short-chain dehydrogenase/reductase SDR [Interproscan]. | 0.03 | OrthoFinder | |
| PTI_04G01050.1 | No alias | Short-chain dehydrogenase/reductase SDR [Interproscan]. | 0.02 | OrthoFinder | |
| SymbC1.scaffold4.779 | 4.779 | Enoyl-(Acyl carrier protein) reductase; Short-chain... | 0.01 | OrthoFinder | |
| SymbC1.scaffold675.2 | 675.2 | Short-chain dehydrogenase/reductase SDR [Interproscan]. | 0.01 | OrthoFinder | |
| TP03G08440.1 | No alias | Short-chain dehydrogenase/reductase SDR [Interproscan]. | 0.03 | OrthoFinder | |
| Vocar.0009s0212.1 | 32893551 | Short-chain dehydrogenase/reductase SDR [Interproscan]. | 0.04 | OrthoFinder | |
| XM_002499674.1 | MICPUN_55872, 55872 | Short-chain dehydrogenase/reductase SDR [Interproscan]. | 0.01 | OrthoFinder | |
| XM_003059227.1 | MicpuC2_17965, 17965 | Short-chain dehydrogenase/reductase SDR [Interproscan]. | 0.01 | OrthoFinder | |
| lcl|BLLF01000239.1_cds_GFH09494.1_3971 | HaLaN_04650, GFH09494 | Short-chain dehydrogenase/reductase SDR [Interproscan]. | 0.02 | OrthoFinder | |
| lcl|LHPG02000003.1_cds_PRW60169.1_6734 | PRW60169 | Retinol dehydrogenase 13 | 0.01 | OrthoFinder | |
| lcl|LHPG02000027.1_cds_PRW05915.1_5945 | PRW05915 | Retinol dehydrogenase 12-like | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | Enrichment |
| MF | GO:0003824 | catalytic activity | IEP | Enrichment |
| MF | GO:0004175 | endopeptidase activity | IEP | Enrichment |
| MF | GO:0004180 | carboxypeptidase activity | IEP | Enrichment |
| MF | GO:0004181 | metallocarboxypeptidase activity | IEP | Enrichment |
| MF | GO:0004222 | metalloendopeptidase activity | IEP | Enrichment |
| MF | GO:0004518 | nuclease activity | IEP | Enrichment |
| MF | GO:0004527 | exonuclease activity | IEP | Enrichment |
| CC | GO:0005886 | plasma membrane | IEP | Enrichment |
| BP | GO:0006508 | proteolysis | IEP | Enrichment |
| MF | GO:0008113 | peptide-methionine (S)-S-oxide reductase activity | IEP | Enrichment |
| MF | GO:0008233 | peptidase activity | IEP | Enrichment |
| MF | GO:0008235 | metalloexopeptidase activity | IEP | Enrichment |
| MF | GO:0008237 | metallopeptidase activity | IEP | Enrichment |
| MF | GO:0008408 | 3'-5' exonuclease activity | IEP | Enrichment |
| MF | GO:0009055 | electron transfer activity | IEP | Enrichment |
| CC | GO:0009521 | photosystem | IEP | Enrichment |
| CC | GO:0009523 | photosystem II | IEP | Enrichment |
| CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | Enrichment |
| BP | GO:0010207 | photosystem II assembly | IEP | Enrichment |
| BP | GO:0015979 | photosynthesis | IEP | Enrichment |
| MF | GO:0016491 | oxidoreductase activity | IEP | Enrichment |
| MF | GO:0016667 | oxidoreductase activity, acting on a sulfur group of donors | IEP | Enrichment |
| MF | GO:0016671 | oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | IEP | Enrichment |
| MF | GO:0016787 | hydrolase activity | IEP | Enrichment |
| CC | GO:0019898 | extrinsic component of membrane | IEP | Enrichment |
| BP | GO:0022607 | cellular component assembly | IEP | Enrichment |
| BP | GO:0034622 | cellular protein-containing complex assembly | IEP | Enrichment |
| BP | GO:0043933 | protein-containing complex subunit organization | IEP | Enrichment |
| BP | GO:0055114 | obsolete oxidation-reduction process | IEP | Enrichment |
| BP | GO:0065003 | protein-containing complex assembly | IEP | Enrichment |
| CC | GO:0098796 | membrane protein complex | IEP | Enrichment |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Enrichment |
| CC | GO:1902494 | catalytic complex | IEP | Enrichment |
| CC | GO:1990204 | oxidoreductase complex | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002347 | SDR_fam | 58 | 260 |
| No external refs found! |