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Aliases : Contig1351.g12461
Description : Synaptic vesicle 2-related protein
Gene families : OG_01_0000495 (OrthoFinder) Phylogenetic Tree(s): OG0000495_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Sro18_g013010.1 | |
| Cluster | HCCA: Cluster_90 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Sro18_g013060.1 | Contig1351.g12466 | Synaptic vesicle 2-related protein | 0.06 | OrthoFinder | |
| SymbC1.scaffold5660.5 | 5660.5 | Major facilitator superfamily [Interproscan]. | 0.01 | OrthoFinder | |
| TP01G03970.1 | No alias | Major facilitator, sugar transporter-like [Interproscan]. | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0016021 | integral component of membrane | IEA | Interproscan |
| MF | GO:0022857 | transmembrane transporter activity | IEA | Interproscan |
| BP | GO:0055085 | transmembrane transport | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004014 | adenosylmethionine decarboxylase activity | IEP | Enrichment |
| MF | GO:0005515 | protein binding | IEP | Enrichment |
| BP | GO:0006576 | cellular biogenic amine metabolic process | IEP | Enrichment |
| BP | GO:0006595 | polyamine metabolic process | IEP | Enrichment |
| BP | GO:0006596 | polyamine biosynthetic process | IEP | Enrichment |
| BP | GO:0008216 | spermidine metabolic process | IEP | Enrichment |
| BP | GO:0008295 | spermidine biosynthetic process | IEP | Enrichment |
| BP | GO:0009308 | amine metabolic process | IEP | Enrichment |
| BP | GO:0009309 | amine biosynthetic process | IEP | Enrichment |
| MF | GO:0016151 | nickel cation binding | IEP | Enrichment |
| MF | GO:0016757 | glycosyltransferase activity | IEP | Enrichment |
| MF | GO:0016829 | lyase activity | IEP | Enrichment |
| MF | GO:0016830 | carbon-carbon lyase activity | IEP | Enrichment |
| MF | GO:0016831 | carboxy-lyase activity | IEP | Enrichment |
| BP | GO:0019627 | urea metabolic process | IEP | Enrichment |
| BP | GO:0042401 | cellular biogenic amine biosynthetic process | IEP | Enrichment |
| BP | GO:0043419 | urea catabolic process | IEP | Enrichment |
| BP | GO:0043605 | cellular amide catabolic process | IEP | Enrichment |
| BP | GO:0044106 | cellular amine metabolic process | IEP | Enrichment |
| BP | GO:0044282 | small molecule catabolic process | IEP | Enrichment |
| BP | GO:0071941 | nitrogen cycle metabolic process | IEP | Enrichment |
| BP | GO:1901565 | organonitrogen compound catabolic process | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR005828 | MFS_sugar_transport-like | 59 | 450 |
| No external refs found! |