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  5. Sro18_g013000.1

Sro18_g013000.1 (Contig1351.g12460)


Aliases : Contig1351.g12460

Description : TPR domain protein


Gene families : OG_01_0000019 (OrthoFinder) Phylogenetic Tree(s): OG0000019_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro18_g013000.1

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold4953.6 4953.6 SET domain [Interproscan]. 0.02 OrthoFinder
SymbC1.scaffold6592.5 6592.5 SET domain [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004252 serine-type endopeptidase activity IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008236 serine-type peptidase activity IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
MF GO:0017171 serine hydrolase activity IEP Enrichment
InterPro domains Description Start Stop
IPR001214 SET_dom 392 576
No external refs found!