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  5. Sro1874_g302980.1

Sro1874_g302980.1 (Contig3840.g29507)


Aliases : Contig3840.g29507

Description : CRAL-TRIO lipid binding domain [Interproscan].


Gene families : OG_01_0000437 (OrthoFinder) Phylogenetic Tree(s): OG0000437_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1874_g302980.1
Cluster HCCA: Cluster_256

Target Alias Description ECC score Gene Family Method Actions
Sro133_g063090.1 Contig2274.g18868 Hypothetical protein 0.03 OrthoFinder
Sro1775_g296890.1 Contig695.g8119 CRAL-TRIO lipid binding domain [Interproscan]. 0.04 OrthoFinder
Sro238_g095600.1 Contig99.g1206 CRAL-TRIO lipid binding domain [Interproscan]. 0.03 OrthoFinder
Sro2456_g328210.1 Contig2438.g19982 Hypothetical protein 0.05 OrthoFinder
Sro32_g021090.1 Contig3715.g28582 CRAL-TRIO lipid binding domain [Interproscan]. 0.03 OrthoFinder
Sro44_g026610.1 Contig358.g4830 CRAL-TRIO lipid binding domain [Interproscan]. 0.04 OrthoFinder
Sro451_g145670.1 Contig1599.g14511 CRAL-TRIO lipid binding domain [Interproscan]. 0.04 OrthoFinder
Sro538_g162600.1 Contig95.g1101 CRAL-TRIO lipid binding domain [Interproscan]. 0.04 OrthoFinder
Sro735_g194890.1 Contig2764.g22261 CRAL-TRIO lipid binding domain [Interproscan]. 0.03 OrthoFinder
Sro994_g229000.1 Contig3591.g27752 CRAL-TRIO lipid binding domain [Interproscan]. 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006753 nucleoside phosphate metabolic process IEP Enrichment
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0006796 phosphate-containing compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009117 nucleotide metabolic process IEP Enrichment
BP GO:0009165 nucleotide biosynthetic process IEP Enrichment
BP GO:0009187 cyclic nucleotide metabolic process IEP Enrichment
BP GO:0009190 cyclic nucleotide biosynthetic process IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
MF GO:0015276 ligand-gated ion channel activity IEP Enrichment
BP GO:0018130 heterocycle biosynthetic process IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
BP GO:0019637 organophosphate metabolic process IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
MF GO:0022834 ligand-gated channel activity IEP Enrichment
MF GO:0022836 gated channel activity IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Enrichment
BP GO:0035556 intracellular signal transduction IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
BP GO:0090407 organophosphate biosynthetic process IEP Enrichment
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR001251 CRAL-TRIO_dom 104 208
No external refs found!