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  5. Sro1863_g302350.1

Sro1863_g302350.1 (Contig1972.g16865)


Aliases : Contig1972.g16865

Description : 15.0 kDa protein


Gene families : OG_01_0003531 (OrthoFinder) Phylogenetic Tree(s): OG0003531_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1863_g302350.1
Cluster HCCA: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000792.41 tig00000792_g4192.t1 Thylakoid lumenal 15.0 kDa protein 2, chloroplastic... 0.02 OrthoFinder
Cpa|evm.model.tig00021128.8 tig00021128_g18890.t1 No description available 0.01 OrthoFinder
Cre15.g636050 30783504, CPLD31 Thylakoid lumenal 15.0 kDa protein 2, chloroplastic... 0.04 OrthoFinder
Cz04g37150.t1 No alias TPM domain [Interproscan]. 0.04 OrthoFinder
Dusal.0352s00010.1 33191234 TPM domain [Interproscan]. 0.01 OrthoFinder
EOD37802 No alias TPM domain [Interproscan]. 0.01 OrthoFinder
PTI_02G03770.1 No alias TPM domain [Interproscan]. 0.07 OrthoFinder
TP05G00110.1 No alias TPM domain [Interproscan]. 0.03 OrthoFinder
Vocar.0017s0073.1 32891461 TPM domain [Interproscan]. 0.01 OrthoFinder
XM_002500670.1 MICPUN_113635, 113635 Hypothetical protein 0.04 OrthoFinder
XM_003064356.1 MicpuC2_54384, 54384 Hypothetical protein 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004181 metallocarboxypeptidase activity IEP Enrichment
MF GO:0004222 metalloendopeptidase activity IEP Enrichment
MF GO:0004518 nuclease activity IEP Enrichment
MF GO:0004527 exonuclease activity IEP Enrichment
CC GO:0005886 plasma membrane IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008235 metalloexopeptidase activity IEP Enrichment
MF GO:0008237 metallopeptidase activity IEP Enrichment
MF GO:0008408 3'-5' exonuclease activity IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
CC GO:0009521 photosystem IEP Enrichment
CC GO:0009523 photosystem II IEP Enrichment
CC GO:0009654 photosystem II oxygen evolving complex IEP Enrichment
BP GO:0010207 photosystem II assembly IEP Enrichment
BP GO:0015979 photosynthesis IEP Enrichment
MF GO:0016209 antioxidant activity IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Enrichment
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016859 cis-trans isomerase activity IEP Enrichment
CC GO:0019898 extrinsic component of membrane IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
CC GO:1990204 oxidoreductase complex IEP Enrichment
InterPro domains Description Start Stop
IPR007621 TPM_dom 101 223
No external refs found!