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  5. Sro184_g079840.1

Sro184_g079840.1 (Contig2216.g18387)


Aliases : Contig2216.g18387

Description : Putative fatty-acid--CoA ligase FadD21


Gene families : OG_01_0000621 (OrthoFinder) Phylogenetic Tree(s): OG0000621_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro184_g079840.1
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
Sro395_g134070.1 Contig4272.g32326 Putative fatty-acid--CoA ligase FadD21 0.02 OrthoFinder
SymbC1.scaffold2.2000 2.2000 Condensation domain; MacB-like periplasmic core domain;... 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004252 serine-type endopeptidase activity IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008236 serine-type peptidase activity IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
MF GO:0017171 serine hydrolase activity IEP Enrichment
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig 140 601
No external refs found!