| Cluster | HCCA: Sro630_g178300.1 details <a href="/cluster/view/4735" class="qtip_tooltip" qtip_href="/cluster/tooltip/4735">Cluster_483</a></strong></td> <td><a href="/cluster/view/4735" data-toggle="tooltip" data-placement="top" title="View cluster as table"><i class="fa fa-list"></i></a> <a href="/cluster/graph/4735" data-toggle="tooltip" data-placement="top" title="View cluster as graph"><i class="fa fa-sitemap"></i></a> <a href="/profile_comparison/cluster/4735" data-toggle="tooltip" data-placement="top" title="Compare profiles in this cluster"><i class="fa fa-area-chart"></i></a> <a href="/heatmap/cluster/4735" data-toggle="tooltip" data-placement="top" title="Heatmap of profiles in this cluster"><i class="fa fa-table"></i></a></td> </tr> </tbody> </table> </div> </div> <br> <h3 class="banner-blue" id="expression_conservation">Expression Context Conservation (<abbr title="Click to show help" href="/help/ecc" data-target="#helpModal">ECC</abbr>)</h3> <div class="table-responsive"> <table class="table table-striped table-separated" id="ecc_hits_table"> <thead> <tr> <th data-sort="string-ins"><span class="sort-icon"></span>Target</th> <th data-sort="string-ins"><span class="sort-icon"></span>Alias</th> <th data-sort="string-ins"><span class="sort-icon"></span>Description</th> <th data-sort="float"><span class="sort-icon"></span><abbr title="Click to show help" href="/help/ecc" data-target="#helpModal">ECC</abbr> score</th> <th data-sort="string-ins"><span class="sort-icon"></span>Gene Family Method</th> <th>Actions</th> </tr> </thead> <tbody> <tr> <td><a href="/sequence/view/301716" class="qtip_tooltip qtip_dynamic_tooltip" qtip_href="/sequence/tooltip/301716">Sro1573_g283401.1</a></td> <td><span class="text-muted">No alias</span></td> <td>Hypothetical protein</td> <td>0.08</td> <td>OrthoFinder</td> <td><a href="/ecc/graph_pair/132866" data-toggle="tooltip" data-placement="top" title="View ECC pair as graph"><i class="fa fa-eye"></i></a> <a href="/ecc/graph/304595/16/1" data-toggle="tooltip" data-placement="top" title="View ECC as graph"><i class="fa fa-sitemap"></i></a></td> </tr> <tr> <td><a href="/sequence/view/304862" class="qtip_tooltip qtip_dynamic_tooltip" qtip_href="/sequence/tooltip/304862">Sro1852_g301740.1</a></td> <td>Contig4136.g31605</td> <td>Hypothetical protein</td> <td>0.08</td> <td>OrthoFinder</td> <td><a href="/ecc/graph_pair/132975" data-toggle="tooltip" data-placement="top" title="View ECC pair as graph"><i class="fa fa-eye"></i></a> <a href="/ecc/graph/304595/16/1" data-toggle="tooltip" data-placement="top" title="View ECC as graph"><i class="fa fa-sitemap"></i></a></td> </tr> </tbody> </table> </div> <br> <h3 class="banner-blue" id="annotation">Functional Annotation</h3> <div class="panel with-nav-tabs panel-default"> <div class="panel-heading"> <ul class="nav nav-tabs"> <li class="active"><a href="#tab1default" data-toggle="tab">GO</a></li> <li><a href="#tab2default" data-toggle="tab">Predicted GO</a></li> <li><a href="#tab3default" data-toggle="tab">InterPro</a></li> </ul> </div> <div> <div class="tab-content"> <div class="tab-pane fade in active" id="tab1default"> <div class="table-responsive"> <table class="table table-striped table-fixed" id="go_table"> <thead> <tr> <th class="col-xs-1" data-sort="string-ins"><span class="sort-icon"></span>Type</th> <th class="col-xs-2" data-sort="string-ins"><span class="sort-icon"></span><abbr title="Click to show help" href="/help/go" data-target="#helpModal">GO</abbr> Term</th> <th class="col-xs-6" data-sort="string-ins"><span class="sort-icon"></span>Name</th> <th class="col-xs-1" data-sort="string-ins"><span class="sort-icon"></span>Evidence</th> <th class="col-xs-2" data-sort="string-ins"><span class="sort-icon"></span>Source</th> </tr> </thead> <tbody> <tr> <td class="col-xs-12"><p>No GO annotation available for this sequence</p></td> </tr> </tbody> </table> </div> <div class="panel-body"> <a href="#" id="go_toggle">Toggle parental</a> </div> </div> <div class="tab-pane fade" id="tab2default"> <div class="table-responsive"> <table class="table table-striped table-fixed" id="predicted_go_table"> <thead> <tr> <th class="col-xs-1" data-sort="string-ins"><span class="sort-icon"></span>Type</th> <th class="col-xs-2" data-sort="string-ins"><span class="sort-icon"></span><abbr title="Click to show help" href="/help/go" data-target="#helpModal">GO</abbr> Term</th> <th class="col-xs-6" data-sort="string-ins"><span class="sort-icon"></span>Name</th> <th class="col-xs-1" data-sort="string-ins"><span class="sort-icon"></span>Evidence</th> <th class="col-xs-2" data-sort="string-ins"><span class="sort-icon"></span>Source</th> </tr> </thead> <tbody> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/5242" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways involving any phosphorylated nucleoside." [GOC:mah]">GO:0006753</a></td> <td class="col-xs-6">nucleoside phosphate metabolic process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/5591" data-toggle="tooltip" data-placement="top" title=""The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell." [GOC:go_curators, GOC:mtg_signaling_feb11]">GO:0007165</a></td> <td class="col-xs-6">signal transduction</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/7013" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways involving a nucleotide, a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic nucleotides (nucleoside cyclic phosphates)." [GOC:ma]">GO:0009117</a></td> <td class="col-xs-6">nucleotide metabolic process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/7058" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways resulting in the formation of nucleotides, any nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic-nucleotides (nucleoside cyclic phosphates)." [GOC:go_curators]">GO:0009165</a></td> <td class="col-xs-6">nucleotide biosynthetic process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/7080" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways involving a cyclic nucleotide, a nucleotide in which the phosphate group is in diester linkage to two positions on the sugar residue." [GOC:go_curators, ISBN:0198506732]">GO:0009187</a></td> <td class="col-xs-6">cyclic nucleotide metabolic process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/7083" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways resulting in the formation of a cyclic nucleotide, a nucleotide in which the phosphate group is in diester linkage to two positions on the sugar residue." [GOC:go_curators, ISBN:0198506732]">GO:0009190</a></td> <td class="col-xs-6">cyclic nucleotide biosynthetic process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/11001" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways resulting in the formation of heterocyclic compounds, those with a cyclic molecular structure and at least two different atoms in the ring (or rings)." [ISBN:0198547684]">GO:0018130</a></td> <td class="col-xs-6">heterocycle biosynthetic process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/12196" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways resulting in the formation of aromatic compounds, any substance containing an aromatic carbon ring." [GOC:ai]">GO:0019438</a></td> <td class="col-xs-6">aromatic compound biosynthetic process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/12387" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways involving organophosphates, any phosphate-containing organic compound." [ISBN:0198506732]">GO:0019637</a></td> <td class="col-xs-6">organophosphate metabolic process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/17826" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways resulting in the formation of nucleobases, nucleosides, nucleotides and nucleic acids." [GOC:mah]">GO:0034654</a></td> <td class="col-xs-6">nucleobase-containing compound biosynthetic process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/18683" data-toggle="tooltip" data-placement="top" title=""The process in which a signal is passed on to downstream components within the cell, which become activated themselves to further propagate the signal and finally trigger a change in the function or state of the cell." [GOC:bf, GOC:jl, GOC:signaling, ISBN:3527303782]">GO:0035556</a></td> <td class="col-xs-6">intracellular signal transduction</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/22090" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways resulting in the formation of substances, carried out by individual cells." [GOC:jl]">GO:0044249</a></td> <td class="col-xs-6">cellular biosynthetic process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/22104" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways resulting in the formation of organic and inorganic nitrogenous compounds." [GOC:jl, ISBN:0198506732]">GO:0044271</a></td> <td class="col-xs-6">cellular nitrogen compound biosynthetic process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/22111" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways involving small molecules, any low molecular weight, monomeric, non-encoded molecule." [GOC:curators, GOC:pde, GOC:vw]">GO:0044281</a></td> <td class="col-xs-6">small molecule metabolic process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/28991" data-toggle="tooltip" data-placement="top" title=""The cellular chemical reactions and pathways involving a nucleobase-containing small molecule: a nucleobase, a nucleoside, or a nucleotide." [GOC:vw]">GO:0055086</a></td> <td class="col-xs-6">nucleobase-containing small molecule metabolic process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/34859" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways resulting in the biosynthesis of deoxyribose phosphate, the phosphorylated sugar 2-deoxy-erythro-pentose." [GOC:chem_mtg]">GO:0090407</a></td> <td class="col-xs-6">organophosphate biosynthetic process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/40516" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways resulting in the formation of a nucleoside phosphate." [GOC:TermGenie]">GO:1901293</a></td> <td class="col-xs-6">nucleoside phosphate biosynthetic process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/40583" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways resulting in the formation of organic cyclic compound." [GOC:TermGenie]">GO:1901362</a></td> <td class="col-xs-6">organic cyclic compound biosynthetic process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/40792" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways resulting in the formation of an organic substance, any molecular entity containing carbon." [GOC:pr, GOC:TermGenie]">GO:1901576</a></td> <td class="col-xs-6">organic substance biosynthetic process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> </tbody> </table> </div> </div> <div class="tab-pane fade" id="tab3default"> <div class="panel-body"> <p>No InterPro domains available for this sequence</p> </div> </div> </div> </div> </div> <div class="row"> <div class="col-lg-12 col-md-12 col-sm-12"> <div class="panel panel-default"> <div class="panel-heading" id="links">External Links</div> <div class="table-responsive"> <table class="table table-striped table-separated"> <tbody> <tr> <td><em>No external refs found!</em></td> </td> </tr> </tbody> </table> </div> </div> </div> </div> <div class="modal" id="profileModal" tabindex="-1" role="dialog" aria-labelledby="profileModalLabel"> <div class="modal-dialog" role="document" style="width:1000px;height:800px;"> <div class="modal-content"> </div> </div> </div> </div> </div> </div> <footer class="footer" id="footer"> <div class="container"> <div class="row"> <div class="col-xs-2"><strong class="text-muted"><a href="/features" class="text-muted">protists.guru</a></strong></div> <div class="col-xs-2"><a href="/about" class="text-muted">About</a></div> <div class="col-xs-2"><a href="/contact" class="text-muted">Contact</a></div> <div class="col-xs-2"><a href="/disclaimer" class="text-muted">Disclaimer</a></div> <div class="col-xs-2"><a href="/privacy" class="text-muted">Privacy policy</a></div> </div> </div> </footer> <div class="modal" id="helpModal" tabindex="-1" role="dialog" aria-labelledby="helpModalLabel"> <div class="modal-dialog" role="document" style="width:1000px;height:800px;"> <div class="modal-content"> </div> </div> </div> <div class="modal" id="loaderModal" tabindex="-1" role="dialog" aria-labelledby="loaderModalLabel"> <div class="modal-dialog" role="document" style="width:1000px;height:800px;"> <div class="modal-content"> <div class="modal-body"> <div id="leafy_loader"></div> <p class="text-center text-muted" id="leafy_loader_text">Loading ... please wait ... </p> <p class="text-center" id="leafy_loader_close_btn" style="display:none"><button type="button" class="btn btn-primary" data-dismiss="modal" style>Close</button></p> </div> </div> </div> </div> <script src="/static/js/jquery.min.js"></script> <script src="/static/js/bootstrap.min.js"></script> <script src="/static/js/stupidtable.min.js"></script> <script src="/static/js/TweenMax.min.js"></script> <script src="/static/js/jquery.qtip.min.js"></script> <script src="/static/js/planet_loader.js"></script> <script>
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