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  5. Sro1817_g299560.1

Sro1817_g299560.1 (Contig1204.g11343)


Aliases : Contig1204.g11343

Description : Leucine Rich Repeat


Gene families : OG_01_0000159 (OrthoFinder) Phylogenetic Tree(s): OG0000159_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1817_g299560.1
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
Sro1021_g232240.1 Contig686.g7986 Leucine Rich Repeat 0.03 OrthoFinder
Sro1104_g241810.1 Contig4546.g33967 Leucine Rich Repeat 0.05 OrthoFinder
Sro1305_g261130.1 Contig1643.g14827 Hypothetical protein 0.03 OrthoFinder
Sro1305_g261140.1 Contig1643.g14828 Leucine Rich Repeat 0.03 OrthoFinder
Sro186_g080590.1 Contig266.g3340 Leucine Rich Repeat 0.03 OrthoFinder
Sro186_g080620.2 No alias Hypothetical protein 0.02 OrthoFinder
Sro1928_g306040.1 Contig2945.g23386 Leucine Rich Repeat 0.05 OrthoFinder
Sro195_g083170.1 Contig4576.g34154 Leucine Rich Repeat 0.04 OrthoFinder
Sro435_g142380.1 Contig492.g6644 Leucine Rich Repeat 0.02 OrthoFinder
Sro496_g154670.1 Contig3388.g26497 Leucine Rich Repeat 0.04 OrthoFinder
Sro614_g175770.1 Contig1589.g14431 Leucine Rich Repeat 0.04 OrthoFinder
Sro820_g207300.1 Contig34.g212 Leucine rich repeat N-terminal domain 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Enrichment
BP GO:0000160 phosphorelay signal transduction system IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0004673 protein histidine kinase activity IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0006810 transport IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
BP GO:0016310 phosphorylation IEP Enrichment
BP GO:0016485 protein processing IEP Enrichment
BP GO:0016540 protein autoprocessing IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
BP GO:0035556 intracellular signal transduction IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0051604 protein maturation IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
MF GO:0140299 small molecule sensor activity IEP Enrichment

No InterPro domains available for this sequence

No external refs found!