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Aliases : Contig350.g4750
Description : Probable E3 ubiquitin-protein ligase hulA
Gene families : OG_01_0000372 (OrthoFinder) Phylogenetic Tree(s): OG0000372_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Sro180_g078710.1 | |
| Cluster | HCCA: Cluster_164 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00020556.65 | tig00020556_g11033.t1 | E3 ubiquitin-protein ligase UPL1 OS=Arabidopsis thaliana | 0.02 | OrthoFinder | |
| Cre01.g012450 | 30788678 | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder | |
| Cre12.g533750 | 30793184 | E3 ubiquitin-protein ligase UPL5 OS=Arabidopsis thaliana | 0.02 | OrthoFinder | |
| Cz15g05050.t1 | No alias | HECT domain; E3 ubiquitin ligase, domain of unknown... | 0.04 | OrthoFinder | |
| OT_04G02240.1 | No alias | Ankyrin repeat-containing domain; HECT domain [Interproscan]. | 0.02 | OrthoFinder | |
| OT_05G01720.1 | No alias | HECT domain [Interproscan]. | 0.02 | OrthoFinder | |
| OT_13G03000.1 | No alias | E3 ubiquitin ligase, domain of unknown function DUF913;... | 0.03 | OrthoFinder | |
| PTI_09G01980.1 | No alias | HECT domain; E3 ubiquitin ligase, domain of unknown... | 0.06 | OrthoFinder | |
| XM_002502841.1 | MICPUN_59359, 59359 | HUWE1/Rev1, ubiquitin binding region; E3 ubiquitin... | 0.02 | OrthoFinder | |
| XM_002508282.1 | MICPUN_60965, 60965 | HECT domain [Interproscan]. | 0.01 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | Enrichment |
| MF | GO:0003690 | double-stranded DNA binding | IEP | Enrichment |
| MF | GO:0003774 | motor activity | IEP | Enrichment |
| MF | GO:0003777 | microtubule motor activity | IEP | Enrichment |
| MF | GO:0003968 | RNA-directed 5'-3' RNA polymerase activity | IEP | Enrichment |
| MF | GO:0005488 | binding | IEP | Enrichment |
| MF | GO:0005515 | protein binding | IEP | Enrichment |
| MF | GO:0005524 | ATP binding | IEP | Enrichment |
| CC | GO:0005634 | nucleus | IEP | Enrichment |
| CC | GO:0005643 | nuclear pore | IEP | Enrichment |
| BP | GO:0006298 | mismatch repair | IEP | Enrichment |
| BP | GO:0006325 | chromatin organization | IEP | Enrichment |
| BP | GO:0006338 | chromatin remodeling | IEP | Enrichment |
| BP | GO:0006913 | nucleocytoplasmic transport | IEP | Enrichment |
| BP | GO:0006928 | movement of cell or subcellular component | IEP | Enrichment |
| BP | GO:0007017 | microtubule-based process | IEP | Enrichment |
| BP | GO:0007018 | microtubule-based movement | IEP | Enrichment |
| MF | GO:0008017 | microtubule binding | IEP | Enrichment |
| MF | GO:0008092 | cytoskeletal protein binding | IEP | Enrichment |
| MF | GO:0015631 | tubulin binding | IEP | Enrichment |
| MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | Enrichment |
| MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | Enrichment |
| MF | GO:0017056 | structural constituent of nuclear pore | IEP | Enrichment |
| MF | GO:0017076 | purine nucleotide binding | IEP | Enrichment |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Enrichment |
| MF | GO:0030983 | mismatched DNA binding | IEP | Enrichment |
| MF | GO:0032553 | ribonucleotide binding | IEP | Enrichment |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Enrichment |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Enrichment |
| CC | GO:0032991 | protein-containing complex | IEP | Enrichment |
| MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | Enrichment |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Enrichment |
| MF | GO:0036094 | small molecule binding | IEP | Enrichment |
| MF | GO:0043167 | ion binding | IEP | Enrichment |
| MF | GO:0043168 | anion binding | IEP | Enrichment |
| BP | GO:0051169 | nuclear transport | IEP | Enrichment |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Enrichment |
| MF | GO:0097747 | RNA polymerase activity | IEP | Enrichment |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | Enrichment |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Enrichment |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR010314 | E3_Ub_ligase_DUF913 | 950 | 996 |
| IPR010314 | E3_Ub_ligase_DUF913 | 642 | 934 |
| IPR010309 | E3_Ub_ligase_DUF908 | 138 | 511 |
| IPR015940 | UBA | 1643 | 1678 |
| IPR025527 | HUWE1/Rev1_UBM | 3436 | 3461 |
| IPR025527 | HUWE1/Rev1_UBM | 3397 | 3423 |
| IPR025527 | HUWE1/Rev1_UBM | 3471 | 3503 |
| IPR000569 | HECT_dom | 4256 | 4559 |
| No external refs found! |